| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0563 |
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| Symbol | |
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| ID | 4033581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 668580 |
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| End bp | 669950 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637973025 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_579830 |
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| Protein GI | 93005393 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAA TTGGCAAAAA CTCTGCTATT AAATGGGGCA TTATTGCCCT CGTCATCATC
GCTTTAGGGG TTTTAGCCTA CAAAACCTTA AAACCAAAAG AAGTAACACC CAACTATCTA
ACAGCGACTG CTGAGATTGG CGATATCGAA AATAACGTTA TGGCATCGGG CAAGGTTAAG
GCTTTAAATA CCGTCGATGT TGGTGCGCAA GTATCTGGTG AAGTGACGCG ACTATTCGTT
GAAGTCGGTG ATGAAGTGCA AAAAGGCGAT TTGATTGCGC AGATTGACCA AGTAACGCAG
AAGAACAGTC TGAGCAATGA GCAAGCAAGC CTTGAGCAAA GTGAAGCGGC GCTACAAAGT
GCACGAGCTG AGTCGTTAAG TCGTCAAGCA GGTTTAAAAA GTGCGCAGGC AGATCTTGCC
AGCCGCCAAG CTGAGTTAAG ACAAGCGCAA GCAGATTTTT CACGCTTGCA AGGCTTACTC
GCTATCGACG CGATATCACA GCAGGATTAT GATACTCAAA GGACAAAGGT ACAAACTGCG
CAGGCAGCAG TCGCCAATGC GCGTGCCTCT ATCGATACTG CTAAAGCCGC TATTGCCACT
ACTGCAGCGA ATATCAATAG TCAACAGGCG GCGTTACGTA AATCTCAAAC CAACGTCAGC
ACCGCGCAAG AGGATTTAAG CTACACCACC ATTCGCGCGC CAATGTCAGG TACTGTAGTA
TCGGTAACGA CTGAGCAAGG GACGACGGTC AATGCCAATC AAAGTGCACC GACCATTGTT
ACCTTAGCTG ATTTATCTAC CGTACGCATT AATGCTCAAA TCTCTGAAGC TGACGTCATT
AATGTCAAAG CGGGCTTGCC TGTTTATTTT AATATCATCG GTAATCCCGA TCAAAAATAT
GATTCGATTC TTAAAGCGAT TGAACCGGCT CCTGAAAAAA TCAGTGATAC CAGCTCGACC
GATGCTGCCA TTTATTATGT CGGTTATATT GAAGTACCCA ATACCGAGCG CCGCTTTCGT
ATTGATATGA CCGCGCAAGT TTATATTGTC ATTAACCAAG CCAAAGATGC GCTACTTATC
CCTTCTGCCG CACTGCAACC TGCCGGTAAA TCTAACAAAA CTGGAAATAA TAAAAAAGCA
TCTACCACTG CGGTTAATAC TAATGGCGAT TCTGCCGCAA CTAAAGCTAG TGTCCGCGTT
CTTAAAACTG ATGGCACAGT GGTTGAACAA GCTGTCACAG TTGGTATTAA TAACCGCGTC
AATGCGGAGA TATTGAGTGG TCTTAAAAAA GGTGACGAGG TTATCTTAAG CGAAGAGGGA
CCAGATAGTG GCAGCAAAGG CAGTGGTGGC AGAGGCGGCC GACCATTTTA G
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| Protein sequence | MRKIGKNSAI KWGIIALVII ALGVLAYKTL KPKEVTPNYL TATAEIGDIE NNVMASGKVK
ALNTVDVGAQ VSGEVTRLFV EVGDEVQKGD LIAQIDQVTQ KNSLSNEQAS LEQSEAALQS
ARAESLSRQA GLKSAQADLA SRQAELRQAQ ADFSRLQGLL AIDAISQQDY DTQRTKVQTA
QAAVANARAS IDTAKAAIAT TAANINSQQA ALRKSQTNVS TAQEDLSYTT IRAPMSGTVV
SVTTEQGTTV NANQSAPTIV TLADLSTVRI NAQISEADVI NVKAGLPVYF NIIGNPDQKY
DSILKAIEPA PEKISDTSST DAAIYYVGYI EVPNTERRFR IDMTAQVYIV INQAKDALLI
PSAALQPAGK SNKTGNNKKA STTAVNTNGD SAATKASVRV LKTDGTVVEQ AVTVGINNRV
NAEILSGLKK GDEVILSEEG PDSGSKGSGG RGGRPF
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