| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0503 |
|---|
| Symbol | rplO |
|---|
| ID | 4035846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 601817 |
|---|
| End bp | 602257 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637972958 |
|---|
| Product | 50S ribosomal protein L15 |
|---|
| Protein accession | YP_579770 |
|---|
| Protein GI | 93005333 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0200] Ribosomal protein L15 |
|---|
| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000432191 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0734154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCTTA GATTAAATGA ATTATCACCA GGTGTTGGCG CAAAGAAAAC TGCCCAACGT
CGTGGTCGTG GTATCGGTTC AGGCCTTGGT AAAACTGGTG GTCGTGGTGT AAAAGGTCAG
AAATCTCGTT CAGGTTCTAG CATACGCTCA GGATTTGAAG GTGGTCAAAT GCCTTTATAT
CGTCGTCTAC CAAAATTCGG TTTTACCAGT AAAATGGCTA TGACGACTGC TGAAGTTCGT
CTGTCTGAAC TGAGCCAAAT TGAAGGCGAT GTCGTTAGTA TTGAAACTTT GAAAGCTGCT
AACCTTATCC GTCGTGATAT GAAGCGTGCG CGCGTTATGT TGTCGGGTGA AGTCACTAAA
GCTTATACTT TTAAAGGTAT CAAAGTGACT AAAGGCGCTA AGCAAGCAAT CGAAGCTGCT
GGTGGTAGCA TCGAGGAGTA G
|
|---|
| Protein sequence | MGLRLNELSP GVGAKKTAQR RGRGIGSGLG KTGGRGVKGQ KSRSGSSIRS GFEGGQMPLY
RRLPKFGFTS KMAMTTAEVR LSELSQIEGD VVSIETLKAA NLIRRDMKRA RVMLSGEVTK
AYTFKGIKVT KGAKQAIEAA GGSIEE
|
|---|
| |