Gene Pcryo_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0480 
Symbol 
ID4035823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp589217 
End bp589702 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content40% 
IMG OID637972935 
Productputative rod shape-determining protein MreD 
Protein accessionYP_579747 
Protein GI93005310 
COG category 
COG ID 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00540297 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.479841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATATC CTGATTCTGA TCATGCAAAT GGGCTGCTGC ATGCCGTGAT TGTACTGAGT 
TTTATTATTG CCTCATCGCT CAGTGTTTAT CCATTAAGTC CTAGTATGGC CACATTGCGT
CCTATGATCA TGATCATGGT ATTGATTTTT TGGTTGTTGT TTCAGCCGCG TTATGTGGGC
ATTTTTAGTG CCTTTGCTAT TGGCCTTATT GCTGATTTGC TGATGGATAC TCATTTAGGG
CAACAGGCTT TTTCTGCTGT GGCAGTGGCG CTTATGATAA AGGTTACCAG TATCTATATC
AGACAGCTAA ATACGATTAG TGCATGGATA ATAGCGAGTT TAGGATTGTT TATATTTCAA
GCGAGTCTGT GGATGCTACA GATGTTTGTA CAAGATGTCT TTGTTGCCCA ATCTACTTTC
TCTTTATTGA TGAGTATTAT TAGCTGGCCA TTGGTACTAT TGACGTTACG AAAATTTGTG
CGTTAA
 
Protein sequence
MAYPDSDHAN GLLHAVIVLS FIIASSLSVY PLSPSMATLR PMIMIMVLIF WLLFQPRYVG 
IFSAFAIGLI ADLLMDTHLG QQAFSAVAVA LMIKVTSIYI RQLNTISAWI IASLGLFIFQ
ASLWMLQMFV QDVFVAQSTF SLLMSIISWP LVLLTLRKFV R