Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0480 |
Symbol | |
ID | 4035823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 589217 |
End bp | 589702 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637972935 |
Product | putative rod shape-determining protein MreD |
Protein accession | YP_579747 |
Protein GI | 93005310 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00540297 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.479841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATATC CTGATTCTGA TCATGCAAAT GGGCTGCTGC ATGCCGTGAT TGTACTGAGT TTTATTATTG CCTCATCGCT CAGTGTTTAT CCATTAAGTC CTAGTATGGC CACATTGCGT CCTATGATCA TGATCATGGT ATTGATTTTT TGGTTGTTGT TTCAGCCGCG TTATGTGGGC ATTTTTAGTG CCTTTGCTAT TGGCCTTATT GCTGATTTGC TGATGGATAC TCATTTAGGG CAACAGGCTT TTTCTGCTGT GGCAGTGGCG CTTATGATAA AGGTTACCAG TATCTATATC AGACAGCTAA ATACGATTAG TGCATGGATA ATAGCGAGTT TAGGATTGTT TATATTTCAA GCGAGTCTGT GGATGCTACA GATGTTTGTA CAAGATGTCT TTGTTGCCCA ATCTACTTTC TCTTTATTGA TGAGTATTAT TAGCTGGCCA TTGGTACTAT TGACGTTACG AAAATTTGTG CGTTAA
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Protein sequence | MAYPDSDHAN GLLHAVIVLS FIIASSLSVY PLSPSMATLR PMIMIMVLIF WLLFQPRYVG IFSAFAIGLI ADLLMDTHLG QQAFSAVAVA LMIKVTSIYI RQLNTISAWI IASLGLFIFQ ASLWMLQMFV QDVFVAQSTF SLLMSIISWP LVLLTLRKFV R
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