Gene Pcryo_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0471 
Symbol 
ID4034828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp578190 
End bp579386 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content47% 
IMG OID637972925 
Productpeptidoglycan-binding LysM 
Protein accessionYP_579738 
Protein GI93005301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.581865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTT CGAGACAAGC CTTATTGGGC ATTGGGATGA TTATCGGTGG TAGCGTGATG 
CTATACGCCA TGGTACAACA AATTGGTGAT ACCAATAAAT CACAGCCAGC ATCGGCAATG
ATCGATCAAC CGAGTGCTGA GCCTACGTCT GTACAACCAC TGACAACAGA TATCGAAACA
GAAAAACGTA TCTTGGCACA AAAACAAAAA GAGCGTGCCG CTCGCGTTGC AGAACAAGAA
AAGCGTGCTC AGCAGTTCTT AACTGAACAA GAAGCGGCAG AGGCGCAAGC ATTGGCAAAA
GCACGCGCTG AAAGTCAGCA ATATCTGGCG AGCACCACAC CAAGTATCGA AGATAACGTT
GATACTAACA GTACTAATGA AGAGGCGACG AAGAACACAC TTGCAACACC TATATCAGCG
CCTTCTAGTG CAGAGGCGTC CACTAATTCC GCTGATGGTG CTGAAGCAAA GAAGAAAGCA
CTAGCGGAGC AGCAGGCAGC TGAAAGACAA GCAACTATTA GAGAGCAAGC TGCTGCTAAG
AAATTAGCAG ATAGCAAAAA AGAAGCAGAC GTTAAAAAGC AGGCTGAAGC GCAAGTAGCT
GCGCAAAAAA AGCGCGAGGC GGATGAAGCC GCAAAAAAGA CCCCACCTAA GTCGCCCTCT
GACTATCAAG TCAAAAGAGG AGATGGGCTG ATTAAACTGG CACGCCAGTA CGATATGCCG
GTAGAAGTCT TAGCTCAAGC CAATAATCTC TCACCATCAA CATCGCTAAA TCTTGGTCAA
ACCATTACGA TCCCATCGCG TAAGCAGGTA GAGCGTTTAG AGCGAGAAGC AACAGCGGCT
GAACAGGCAC GTGAAGAAAA GCGTCAAAGA GAAGAAGCTT TAGTGAAAAA GTCAGCAGAC
GCTAAACGTG ATGCTCAGCA AAAACTCAGT GAAGCCCGTA AAGAAGTCAA AGAAACCGAT
GCTAAAGGTA GCTTTGGGGT ACAAGTAGCG TTAGCAAACG ACCAATCCAA AGCGGATGAG
ATGGCAAAAA AATTCCAATC TGCAGGTTAT CAAGTTAAGA CCAGCCCGAC GAGTCGCGGT
GTACGGGTTA TTGTCGGTCC TGAGCGTGGT AAAGTAGCCG CTTTAGCCTT GAAGGATAAG
ATTAATAGTG ACCCTAAAGT GAATACCACC AGTGCTTGGG TATTATACTG GCGCTAG
 
Protein sequence
MNFSRQALLG IGMIIGGSVM LYAMVQQIGD TNKSQPASAM IDQPSAEPTS VQPLTTDIET 
EKRILAQKQK ERAARVAEQE KRAQQFLTEQ EAAEAQALAK ARAESQQYLA STTPSIEDNV
DTNSTNEEAT KNTLATPISA PSSAEASTNS ADGAEAKKKA LAEQQAAERQ ATIREQAAAK
KLADSKKEAD VKKQAEAQVA AQKKREADEA AKKTPPKSPS DYQVKRGDGL IKLARQYDMP
VEVLAQANNL SPSTSLNLGQ TITIPSRKQV ERLEREATAA EQAREEKRQR EEALVKKSAD
AKRDAQQKLS EARKEVKETD AKGSFGVQVA LANDQSKADE MAKKFQSAGY QVKTSPTSRG
VRVIVGPERG KVAALALKDK INSDPKVNTT SAWVLYWR