| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0439 |
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| Symbol | |
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| ID | 4034238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 537652 |
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| End bp | 538890 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637972892 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_579706 |
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| Protein GI | 93005269 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACA ACTTGACGTC CCTACACCCT TATCCATTCG CTAAGATGGC CACTTTACTG
GCTGATAGTA CTCCAGCCCA TAGCTATGAT GAAATCAAAC TGGGTATTGG TGAGCCAAAA
CATGCGCCGC CAGCCTTTGT TCTGGACGTA CTACGCGAAA ACTTGGACAA AATAAGCCAT
TATCCGACCA CAAATGGACT GTTTGAGCTG CGTCAAACCA TTGCTCATTG GCTTGAGAAG
CGCTTTTTCT TAAATCACCT CAACCCTAAT ACGCAAGTAT TGCCAGTAAT GGGCACACGT
GAGGCAATAT TTAGTATCGT GCAGGCAGTG ATTAATCACG AGACAGAGAC TGTTAGTCAG
ACGGCAACGC TCAACCAATC GCCTACTCCT ACGCCTATAG TAGTTATGCC CAATCCCTTT
TATCAGATAT ATGAAGGGGC GGCGATATTA GCGCAAGCAA CGCCTTATTT TATCCCTTGC
ACCTCAGACA ATAGCTTTAA GGGGGATTTT CGTAGTGTGC CAAAAGACGT CTGGACGCGT
ACACAGCTCT TATTTGTCTG TAGCCCAAAC AACCCAACCG GTTCAGTGAT GACGATGGAT
GACTGGGAGC AAGTGTTGCG CCTATCAGAC CAATATGGCT TTATCATTGC CAGCGACGAG
TGTTATAGCG AGCTGTATTT TGATAAAGCG CCAATAGGAT TGTTGCAAGC CTGCGCGGCC
CTTGGTCGAC ACGATTTCAA AAATTGTCTG GTGTTTCACT CTTTATCGAA GCGCTCAAAC
CTACCCGGTT TGCGCTCAGG CTTTGTGGCA GGCGATGCCA CTATCTTGCA GGCTTATTTA
CAATACCGCA CCTATCAGGG TTGTGCGATG CCGATACCTC ATCAGCTGGC GTCTATCGCC
GCTTGGGAAG ATGAGAAGCA TGTGGCGCAC AATCGAGCGC TGTATCAAGA AAAGTTTGCA
CTCTGGATGT CGGAGCTTGG AGAATTACTG GAGTTACGTA TGCCTGAGGC AGGATTTTAC
TTTTGGATAA AGGCGCCTGA GCAATTCGGT GGTGATGATG AATTATTTGT CAAAGCACTC
TATGAGGATG CCAATATTCA TGCACTAGCG GGTCGTTACT TATCGCGCGA GGTCAATGGT
GAAAATCCGG GGCAAGGCTA TGTGCGTATC GCTTTGGTGG CAAGCGTCGA GGAAAGTCGC
GAGGCAATCA GGCGCATTCG TCAATTACTC GGTGCTTAA
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| Protein sequence | MNHNLTSLHP YPFAKMATLL ADSTPAHSYD EIKLGIGEPK HAPPAFVLDV LRENLDKISH
YPTTNGLFEL RQTIAHWLEK RFFLNHLNPN TQVLPVMGTR EAIFSIVQAV INHETETVSQ
TATLNQSPTP TPIVVMPNPF YQIYEGAAIL AQATPYFIPC TSDNSFKGDF RSVPKDVWTR
TQLLFVCSPN NPTGSVMTMD DWEQVLRLSD QYGFIIASDE CYSELYFDKA PIGLLQACAA
LGRHDFKNCL VFHSLSKRSN LPGLRSGFVA GDATILQAYL QYRTYQGCAM PIPHQLASIA
AWEDEKHVAH NRALYQEKFA LWMSELGELL ELRMPEAGFY FWIKAPEQFG GDDELFVKAL
YEDANIHALA GRYLSREVNG ENPGQGYVRI ALVASVEESR EAIRRIRQLL GA
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