Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0439 |
Symbol | |
ID | 4034238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 537652 |
End bp | 538890 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637972892 |
Product | succinyldiaminopimelate transaminase |
Protein accession | YP_579706 |
Protein GI | 93005269 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCACA ACTTGACGTC CCTACACCCT TATCCATTCG CTAAGATGGC CACTTTACTG GCTGATAGTA CTCCAGCCCA TAGCTATGAT GAAATCAAAC TGGGTATTGG TGAGCCAAAA CATGCGCCGC CAGCCTTTGT TCTGGACGTA CTACGCGAAA ACTTGGACAA AATAAGCCAT TATCCGACCA CAAATGGACT GTTTGAGCTG CGTCAAACCA TTGCTCATTG GCTTGAGAAG CGCTTTTTCT TAAATCACCT CAACCCTAAT ACGCAAGTAT TGCCAGTAAT GGGCACACGT GAGGCAATAT TTAGTATCGT GCAGGCAGTG ATTAATCACG AGACAGAGAC TGTTAGTCAG ACGGCAACGC TCAACCAATC GCCTACTCCT ACGCCTATAG TAGTTATGCC CAATCCCTTT TATCAGATAT ATGAAGGGGC GGCGATATTA GCGCAAGCAA CGCCTTATTT TATCCCTTGC ACCTCAGACA ATAGCTTTAA GGGGGATTTT CGTAGTGTGC CAAAAGACGT CTGGACGCGT ACACAGCTCT TATTTGTCTG TAGCCCAAAC AACCCAACCG GTTCAGTGAT GACGATGGAT GACTGGGAGC AAGTGTTGCG CCTATCAGAC CAATATGGCT TTATCATTGC CAGCGACGAG TGTTATAGCG AGCTGTATTT TGATAAAGCG CCAATAGGAT TGTTGCAAGC CTGCGCGGCC CTTGGTCGAC ACGATTTCAA AAATTGTCTG GTGTTTCACT CTTTATCGAA GCGCTCAAAC CTACCCGGTT TGCGCTCAGG CTTTGTGGCA GGCGATGCCA CTATCTTGCA GGCTTATTTA CAATACCGCA CCTATCAGGG TTGTGCGATG CCGATACCTC ATCAGCTGGC GTCTATCGCC GCTTGGGAAG ATGAGAAGCA TGTGGCGCAC AATCGAGCGC TGTATCAAGA AAAGTTTGCA CTCTGGATGT CGGAGCTTGG AGAATTACTG GAGTTACGTA TGCCTGAGGC AGGATTTTAC TTTTGGATAA AGGCGCCTGA GCAATTCGGT GGTGATGATG AATTATTTGT CAAAGCACTC TATGAGGATG CCAATATTCA TGCACTAGCG GGTCGTTACT TATCGCGCGA GGTCAATGGT GAAAATCCGG GGCAAGGCTA TGTGCGTATC GCTTTGGTGG CAAGCGTCGA GGAAAGTCGC GAGGCAATCA GGCGCATTCG TCAATTACTC GGTGCTTAA
|
Protein sequence | MNHNLTSLHP YPFAKMATLL ADSTPAHSYD EIKLGIGEPK HAPPAFVLDV LRENLDKISH YPTTNGLFEL RQTIAHWLEK RFFLNHLNPN TQVLPVMGTR EAIFSIVQAV INHETETVSQ TATLNQSPTP TPIVVMPNPF YQIYEGAAIL AQATPYFIPC TSDNSFKGDF RSVPKDVWTR TQLLFVCSPN NPTGSVMTMD DWEQVLRLSD QYGFIIASDE CYSELYFDKA PIGLLQACAA LGRHDFKNCL VFHSLSKRSN LPGLRSGFVA GDATILQAYL QYRTYQGCAM PIPHQLASIA AWEDEKHVAH NRALYQEKFA LWMSELGELL ELRMPEAGFY FWIKAPEQFG GDDELFVKAL YEDANIHALA GRYLSREVNG ENPGQGYVRI ALVASVEESR EAIRRIRQLL GA
|
| |