Gene Pcryo_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0419 
Symbol 
ID4034050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp508432 
End bp511398 
Gene Length2967 bp 
Protein Length988 aa 
Translation table11 
GC content45% 
IMG OID637972868 
ProductDNA polymerase I 
Protein accessionYP_579686 
Protein GI93005249 
COG category[L] Replication, recombination and repair 
COG ID[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains 
TIGRFAM ID[TIGR00593] DNA polymerase I 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA ACGATCACAA CTCCCACTCG CCTATTAATC CCAATACGCT ACCGAATTTT 
GCAACGATGC CCAATGTGGC GACAATGGAC ACCACGCATG TGGACAAAAA CCAGCCACCT
TTTATCTTGG TCGATGGCTC TTACTATCTG TTTCGTACCT ATCATGCGCT GCCAAAAACC
ATGCAGAATT CGCAAGGGCT AGTCACCAAT GCAATACGTG GCACGCTCAA TGCACTTTTA
AAGCTGATGC GCCGTTATCA CCCAACCCAT ATGGCCGTTT GTTTTGATAC CAAGTCACCG
ACCTTTCGTC ATGCTATGTC AGAAGAGTAC AAAGCCAATC GTCCAAAAAT GGATATCGAG
CTTGCCGAGC AGATTCCTTA TATTCATCGT TTGGTCACTG CGCTTGGGAT TCCACTGTTA
CGTATCGAAG GCGCAGAAGC GGACGATATT ATCGGTACGC TCGCCTATCG TGCAGTTGCC
GAAGGGCATC ATGTGGTTAT CTCAACTGGA GATAAAGATA TGATGCAGCT GATTAATGAC
TGCGTAATAC TAGAAGATAG CTTCACAGGC AAGATGACTG ATAGCGCTGG CGTGGTTGAA
AAATTCGGTA TCAATCCTGA ACAGATGATT GATTTTTTAA CTTTGATGGG CGATTCCTCT
GACGGTATCA AAGGCGTACC CGGTATTGGT AAAAAGACCG CCAAAGATTT GCTCAATGAA
TATGGCAATA TCGATAATAT GCTCAAAAAT GTCGCCAATA TCAAAGGGCG TGCTGGCAAA
AACTTGCTCG AATATGCCGA TGATATTCCG ATGAACGCGC AGCTGGCAAC CATTGTTACT
GATTTAGAAG TGGGGCAAGA CTGGCAAGAT TTAAAAATAA ACACTGATCC TTGCGCCCAC
ATCAATGAGC TACGTGAGCT ATATAGTGAG CTCGAATTTA GAAATGAGTT AGCGTCACTT
GATCACCCTA ATCATCCTGC CAATGGTAAT GGGCATGGCA CGCAAAGTGT TGCTCATAGT
CAGGCTGATG CTGAGTCACA AGCGCAAATC GCTAAATCCC TACAATCAAG CACCATCGGT
GATATTACCG ATAGCAAAAT TCATGATAGA GCATGGCATA CTATTTTAGA CGAGTCTGCC
TTTGACAACT TAGTTCAATT GTTAGCATCT GCGCCGCATT TCGTTATCGA TACCGAAACC
ACGAGTGTCT ATTGGCGTCA GGCTGAATTG GTTGGCTTGT CTTTTGCTGT GCAAGCACAC
GAAGCTTATT ATATTCCGCT GACTCATGCG CTAGAAGGCG ATGAATTAAT AGCAAAACAG
CTCGACCGCG ATACCGTTTT GGCGCGTTTA AAGCCTATTT TAGAAAACCC AAACATCGGT
AAAATTGGTC AACATTTAAA GTATGATGCC CATATTCTTA GCCTTTATGA TATAAACCTC
TTAGGCAATA TTCATGACAA GCCCAACAAT TGGGCGATGG ATACTATGCT TGCCAGCTAT
GTGATTAATG CTGCCATTAC CCGTCATGGT ATGGATGATT TAGCACGGCA TTACCTGCAA
ACGCAGACCA TCAGCTTTGA AGATGTCGCT GGTAAAGGCG CTAAGCAAGT GAGTTTCGAT
CAAGTAGCGA TTGATATTGC TAGCGACTAT GCGTGTGAAG ATGCCGATAT TACTTATCAG
TTGTTTGATT TGTTTAGCAA AAAACTTGCT GATGATACCA ATAACGCTAA GCTGCTACAC
GAGCTAGAAA TCCCAACAGC GGAAATACTG TGCCAAATGG AAGCAAACGG TATCTTAATT
AGGCGTCCGT TTTTAAACGA GCTATCTAAA CGCTTTGATG AAGAAATCAT TGCCCTAGAA
AAACGTGCGT ACGAAGTCGC CGGTGAAGAG TTTAATCTTG GCTCTCCTAA GCAGCTTGGC
GAGATGTTAT TCGATAAACT TGGCGTCGTG GGTGGCAAAA AAACCAAAAC TGGTCAATAT
TCTACCGGTG AAGCCGTCTT ATCAAAAATC GACCATCCTT TGGTCGATAT CACCCTAGAG
TATCGCGGAC TCTCTAAACT TAAGAGCACC TATACCGATG CGCTTGATAA TGTAGCAGAT
GCCAAGACTG ACCGTGTGCA TACCAGCTAT CATCAAGCAT TGACCAGTAC TGGGCGCTTA
TCTTCGACTG ATCCCAATTT ACAAAATATT CCTATTCGTA CCGCTACTGG TCGCTTGATT
CGTCAAGCAT TTATTGCGCC AGAAGGTCGA GTCATATTAG CGGCGGATTA TTCGCAAATT
GAGCTGCGTT TGATGGCGCA TTTCTCAGGT GATAAAAATC TAACTCATGC CTTTAATGAA
GGGCTAGATA TTCATGCCGC CACTGCCGCC GAAGTACTAG GAAAAGAGGT CGCAGAGGTT
ACAGCAACCG AGCGCCGTAA TGCCAAAGCC ATTAACTTTG GTCTGCTATA TGGCATGAGC
GCCTTTGGAC TAGCCAAACA GTTACAGATG AGCCGTAGTG AGGCGCAAGA CTACATTGAC
ATGTATTTTG AGCGCTATCC TGGCGTCAAA GACTATATGA TCAATACTCG TGCCAGCGCT
TATGAGCATG GCTATATCGA GACGATATTG GGTCGTAAGC TTTATACCCC TGATATCAAT
CACAGCAATC GCATGGTCAA ACAAGGCGCT GAACGGGCAG CGATTAACGC GCCATTACAA
GGTTCTGCAG CTGACTTGAT TAAGCTTGCA ATGATTGCCG TCGACAAAGT ATTACCTAAA
GAGCAGGCAA AAATGCTACT GCAAGTACAT GATGAGCTAG TGTTCGAAGT CGATGCTGAC
AAGGTCGATG AGATAAGCCA ATTGATTACT AATGCTATGC AAGATGTCTT GACAGCAACA
GCAGTTGAAA AAGGCTGGAA CGTCAATTTT GCAGTGCCGC TATTGGTTGA GACGGATAGT
GGTCAGAATT GGGATGAGGC GCATTGA
 
Protein sequence
MTANDHNSHS PINPNTLPNF ATMPNVATMD TTHVDKNQPP FILVDGSYYL FRTYHALPKT 
MQNSQGLVTN AIRGTLNALL KLMRRYHPTH MAVCFDTKSP TFRHAMSEEY KANRPKMDIE
LAEQIPYIHR LVTALGIPLL RIEGAEADDI IGTLAYRAVA EGHHVVISTG DKDMMQLIND
CVILEDSFTG KMTDSAGVVE KFGINPEQMI DFLTLMGDSS DGIKGVPGIG KKTAKDLLNE
YGNIDNMLKN VANIKGRAGK NLLEYADDIP MNAQLATIVT DLEVGQDWQD LKINTDPCAH
INELRELYSE LEFRNELASL DHPNHPANGN GHGTQSVAHS QADAESQAQI AKSLQSSTIG
DITDSKIHDR AWHTILDESA FDNLVQLLAS APHFVIDTET TSVYWRQAEL VGLSFAVQAH
EAYYIPLTHA LEGDELIAKQ LDRDTVLARL KPILENPNIG KIGQHLKYDA HILSLYDINL
LGNIHDKPNN WAMDTMLASY VINAAITRHG MDDLARHYLQ TQTISFEDVA GKGAKQVSFD
QVAIDIASDY ACEDADITYQ LFDLFSKKLA DDTNNAKLLH ELEIPTAEIL CQMEANGILI
RRPFLNELSK RFDEEIIALE KRAYEVAGEE FNLGSPKQLG EMLFDKLGVV GGKKTKTGQY
STGEAVLSKI DHPLVDITLE YRGLSKLKST YTDALDNVAD AKTDRVHTSY HQALTSTGRL
SSTDPNLQNI PIRTATGRLI RQAFIAPEGR VILAADYSQI ELRLMAHFSG DKNLTHAFNE
GLDIHAATAA EVLGKEVAEV TATERRNAKA INFGLLYGMS AFGLAKQLQM SRSEAQDYID
MYFERYPGVK DYMINTRASA YEHGYIETIL GRKLYTPDIN HSNRMVKQGA ERAAINAPLQ
GSAADLIKLA MIAVDKVLPK EQAKMLLQVH DELVFEVDAD KVDEISQLIT NAMQDVLTAT
AVEKGWNVNF AVPLLVETDS GQNWDEAH