| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0417 |
|---|
| Symbol | |
|---|
| ID | 4034048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 506802 |
|---|
| End bp | 507590 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637972866 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_579684 |
|---|
| Protein GI | 93005247 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAT TCATTACGGG TGCATCACGC GGTATCGGTC TAGCGACAGC AAAACGATTG
CTCGCAAAAG GTCATAGCGT CGGTCTTTTT GATATTGACA CGGTTGAGCT TGAGCGTGCG
ATTGATGATA AAACTTTTAA AAAAGCGCTA AAAGGCAATC GTCTCGTCCA TGGTCATCTA
GATGTCATTG ACCCTGAAGC ATGGGATACG GCAATCGATC ATATGCTGGA GAATTTTGGT
GGTATTGATG TCTTGATTAA TAATGCTGGC GTATTGGTGA GTGGCGCGTT GCCCCATACT
GACTTGGACA AGCAATTGTC ATTGATTGAT ATCAATTGTA AAGGTGTGCT CATCGGCTGT
CATAAGCTAG CGCCGCATTT AGCCGACAGC AAAAACGCCA AAATCATCAA TCTCTCATCT
GCCTCAGCGA TATATGGTCA ATCTGAAGTG GCACCTTATT CTGCCAGTAA ATTCTTTGTC
CGCGGTTTAA CCGAAGGGCT AAACATTGAA TATGTTGAGC TAGGCATCAA AGTGATTGAT
GTCATGCCAT TGTGGGTAAA ATCCGACATG ACGAAAGACA TCAAGGTCAC CAGTATCGAC
CGTTTGGGCA TCAATCTAAC CGTTGACGAT GTGGCTAAGA CCTTGTGTAA ATTAAGCGCT
CAGCCGAATC GTAAACTGTC ACGGACTCAC TATCCTATTG GCTTTCCTGC GAAAATGCTG
CATACAGCCT CGCAAGTCGC ACCTGACTCA TTAATGCGCT TTATCAATAG TAAAATCGGT
ACTAAATAA
|
|---|
| Protein sequence | MNIFITGASR GIGLATAKRL LAKGHSVGLF DIDTVELERA IDDKTFKKAL KGNRLVHGHL
DVIDPEAWDT AIDHMLENFG GIDVLINNAG VLVSGALPHT DLDKQLSLID INCKGVLIGC
HKLAPHLADS KNAKIINLSS ASAIYGQSEV APYSASKFFV RGLTEGLNIE YVELGIKVID
VMPLWVKSDM TKDIKVTSID RLGINLTVDD VAKTLCKLSA QPNRKLSRTH YPIGFPAKML
HTASQVAPDS LMRFINSKIG TK
|
|---|
| |