| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0379 |
|---|
| Symbol | |
|---|
| ID | 4034554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 461111 |
|---|
| End bp | 461926 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637972828 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_579646 |
|---|
| Protein GI | 93005209 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3298] Predicted 3'-5' exonuclease related to the exonuclease domain of PolB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.011615 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAAG CTTTTTCGTC TGACCCTATT TTGGTCTTTG ATATTGAAAC GGTTGCAGAT
ACCGATGCTG CCCGCCGTAT CTATCCGCAA TTGGCTAAGC TCAACGATGC AGATACACTC
AGTGCGTTAA CTGCCATTCG TATACAAGAA GCCGGGCATG ATTTTATGCG TTTGCCATTA
CAGCGCATTG TCTGTATCTC TGCTCTATAT ATTAAAGATG GCACATTTTC ATTATTTTCC
CTTACTGCAG ACAAATTTAG CGAAGAAGAG ATTCTTGCCA AGTTTTTTCG CGCCTTTAAT
GATATTGCAA AACTGCCTAA ATTGATTAGC TGGAATGGTT CAGGTTTTGA CATTCCTGTA
CTTATTTATC GTGCCATGCA ATATGACTTG GCAGCGCCTT GGTTATTTGA AGAAGGTGAG
CGTATCAAAA ACATGCGTTT TGATAATTAT GTCAATCGCT TTCATACCCG CCATATTGAC
TTGATGGATC GATTTAGCCA ATACGGTGCC AGCCGCCGCG AGGCTATGGA TGTCGTTGCT
AGTCTATATG GTTTACCCGG TAAAACAGAT GTTGATGGCA GTATGGTCGG CGAGCTTGTC
AGCAATAATG ACTGGCAAAC GCTGTCAATA TATTGCGAGT CTGATGTGAT GAATACTTGG
CTAATATATC TGCGTTGGCT GCGCCTGACC GGTCAGCTAT CCTTGTCAGA TTTTGCCATT
TGGCAGCAGC AAAGCCGTGA TTATTTAACC AAATTTTCCC AAGTAGATGG CACGCCACGT
CATCAGGCGT TTTTGAATGA CTGGCTTATC AGCTAG
|
|---|
| Protein sequence | MSQAFSSDPI LVFDIETVAD TDAARRIYPQ LAKLNDADTL SALTAIRIQE AGHDFMRLPL
QRIVCISALY IKDGTFSLFS LTADKFSEEE ILAKFFRAFN DIAKLPKLIS WNGSGFDIPV
LIYRAMQYDL AAPWLFEEGE RIKNMRFDNY VNRFHTRHID LMDRFSQYGA SRREAMDVVA
SLYGLPGKTD VDGSMVGELV SNNDWQTLSI YCESDVMNTW LIYLRWLRLT GQLSLSDFAI
WQQQSRDYLT KFSQVDGTPR HQAFLNDWLI S
|
|---|
| |