Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0351 |
Symbol | |
ID | 4033633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 427681 |
End bp | 429756 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637972800 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_579619 |
Protein GI | 93005182 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACC CTATCGCACC GCTTACCTCT AAAGACATCA ATACTGCAAA ATCTGCAGCA AACGAAGATG CTATCGTGGC TCAAATGCGC ACGTTTATTG ATGCCCTTAA GAAGCACAAT TATGCCTATT ATGTGCTCGA CAATCCCATC TTAGAAGACA GCGAATACGA TCAGTTGCGT CGCTCTTTAT TGGAGCTTGA AGAAGAATAT CCCGATTTAA TACAGCCGGA TAGCCCAATC AATCAAGTTG GCGATATGCC GCTATCGGCA TTTACGCAAG TCACCCATGA TATTCCGATG CTGTCGCTTG GCAACGTCTT TGAATACGAT GATTTGCGTG ATTTTATGCG CCGCGTTAAT GACCGCTTAA GCGTGGCTCA GCAAAGCCCT GAATACGAGA TGGAGCTAAA GCTAGATGGC TTGGCGGTAT CGCTCAAATA TGCTTATGGC AAGTTTGTCC AAGCGGTGAC ACGCGGTGAT GGACAAACGG GCGAGGATAT TACCCAAAAT GCCAAAACTA TCCGTAACTT GCCGCTATGG ATTCCTGCTG CAAGCGATAT TGAGCTATTA GAAGTACGCG GTGAAGTGCT GATGCCGAAA GCGGGCTTTG AGCGTTTGAA CCGCCTTGCT GAAGAAAAGG GCGACAAAAC TTTTGCCAAT CCACGCAATG CTGCCGCTGG AAGTTTAAGA CAACTTGATC CCGCCATTGC CGCTAGCCGT CCGCTCGCGT TTTATTGCTA TTCTGTCAAT CAAGGGTTAC CTGAGCATAT CAAAACCCAA TCAGCAGCGC TTGCTTGGCT AAAAACCATT GGCTTTACCG TCAGTGCAGT TGAGGTAGTA CAAAATCCAC GCGAGGCTCA AGCCTATTAT GAATCGGTAA AGGAGACACG TGGCGATCTG CCGTTCGAGA TTGATGGTAT GGTCATCAAG GTCAATAGCT TGGCGTTGCA GCAACAGCTT GGTTTTTTAT CGCGTGAGCC GCGCTGGGCA ACCGCTTATA AATTCCCTGC CGAAACCGTC ATGACACGCT TGCATGCTAT CGAGTGGCAA GTCGGACGCA CTGGCGCGAT TACTCCAGTC GGTAAATTAG AACCCGTGAA AGTCGGTGGC GTCACGGTCA GCAATGTCAC GCTGCATAAC TTTGGTGAGA TTCAGCGATT GGATGTGCGT GCAGGCGATA TGGTCAGCGT CCATCGTGCA GGGGATGTGA TACCTAAAGT CACCCGCGTT TGGACAGATC AGCGTCCAGA AAACTCTGAA CCCGTTAAGT TGCCATCGAC TTGCCCAGTA TGCGACTCGC CAGTGGTGCT GCCCAAAGAT GAAGCATTGG CGCGTTGCAC CGGTGGGCTA TTTTGTCCCG CGCAGCAGGT CGAGGCGCTC ATTCACTTTG TCTCGCGTCG GGCGATGGAT ATCGATGGCT TAGGCGCAAG TTGGCTGATT AGCTTTTTTG AGCACGGTTT GGTCAAGACC GTTGCCGATA TCTATCAGTT GCACAATCAT CAAGAGGAGC TGATTACGCT TGAGAAACTG GGCGAAAAAT CTGTTCAAAA TATCCTCAGC GCTATCGAAG CCAGTAAGCA GACGACGCTC GCACGCTTTA TCTATGCGCT GGGTATTCGC GGTGTCGGTG AGACGACGGC GCAAAACCTC GCTCAACAAT TTGGCGATCT TGATGCCTTA ATGTCTGCCA GTATCGAAAA ACTGCTACTC ACGCCAGATG TGGGTGCTAT TACCGCTGAA CTTACTTATA AATTCTTTCG CGCACCGCAT AATATCGAAG TCATCAATGC ATTACGCGAG GCAGGCGTGC ATTGGGATAA GGTTGAGCAG GTCGCGTCAG AAGGATTGCC GCTCGATGGT CAAACATGGG TGATTACTGG CGCGCTTGAT AGCATGGCAC GCGATGAAGC CAAAGCCAAA CTGCAAGCGC TTGGTGCCAA AGTATCTGGT AGCATCTCTG CAAAAACCAC GGCGTTACTG GCAGGTGATA AGGCTGGCTC AAAAATGGCA AAAGCTGAAA AACTGGGCGT TAAAGTAGTG GGTGAAGAAG AGTTTTTGGT GTTGGTTGGG GAGTAG
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Protein sequence | MTDPIAPLTS KDINTAKSAA NEDAIVAQMR TFIDALKKHN YAYYVLDNPI LEDSEYDQLR RSLLELEEEY PDLIQPDSPI NQVGDMPLSA FTQVTHDIPM LSLGNVFEYD DLRDFMRRVN DRLSVAQQSP EYEMELKLDG LAVSLKYAYG KFVQAVTRGD GQTGEDITQN AKTIRNLPLW IPAASDIELL EVRGEVLMPK AGFERLNRLA EEKGDKTFAN PRNAAAGSLR QLDPAIAASR PLAFYCYSVN QGLPEHIKTQ SAALAWLKTI GFTVSAVEVV QNPREAQAYY ESVKETRGDL PFEIDGMVIK VNSLALQQQL GFLSREPRWA TAYKFPAETV MTRLHAIEWQ VGRTGAITPV GKLEPVKVGG VTVSNVTLHN FGEIQRLDVR AGDMVSVHRA GDVIPKVTRV WTDQRPENSE PVKLPSTCPV CDSPVVLPKD EALARCTGGL FCPAQQVEAL IHFVSRRAMD IDGLGASWLI SFFEHGLVKT VADIYQLHNH QEELITLEKL GEKSVQNILS AIEASKQTTL ARFIYALGIR GVGETTAQNL AQQFGDLDAL MSASIEKLLL TPDVGAITAE LTYKFFRAPH NIEVINALRE AGVHWDKVEQ VASEGLPLDG QTWVITGALD SMARDEAKAK LQALGAKVSG SISAKTTALL AGDKAGSKMA KAEKLGVKVV GEEEFLVLVG E
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