Gene Pcryo_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0336 
Symbol 
ID4033618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp406657 
End bp407325 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content43% 
IMG OID637972785 
Productamino acid ABC transporter permease 
Protein accessionYP_579604 
Protein GI93005167 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGA CCGAACTTGC AACTGCCTAT CCCGGTTTGA TGGGTGGCAT GCTGACGACT 
TTAAAAGTAT TATTTTTAGC AATCTTAGGC GGTCTCAGCT TAGGGACGGT ATTGGCTTTG
ATGCGTTTGT CTGGTATCAA AGCACTTGAG ATACCTGCAA AGCTATACGT CAATTATTTC
CGTTCTGTGC CATTGCTGCT CGTACTTCTC TGGTTTTATT TTGCCGTACC GATGATTTAT
TTTTGGGTCG CTGGTAAATA TCTGCAACTC GATACAGCTT TTACCTCGTG TGTAGTCGCC
TTTATGATGT TTGAAGCGGC ATATTTTTCA GAGGTGGTAC GTGCGGGTAT CCAATCTATC
GGCAGTGGAC AGGTTAACGC TGCCAAAGCG CTCGGTATGA CCTATGGGCA AACGATGCGC
TTGATTATTT TGCCGCAGGC GTTTCGCAAG ATGCTACCGC TGATTTTGCA GCAATGTATT
ATTTTATTCC AAGATACGAC ATTGGTTTTT GCAATTGGCT TGACGGATTT TTTCCGCGCC
GCTTATGTAC GCGGTGAGCT GATGGGTTTA TTAACGCCCT ATATATTAGG AGCAGGCGCT
GTTTATTTTA TTATCAGTTT GAGTGCCTCT ATTGGCGTAC AACAAGTACA AAAGCGTTTA
AGATTCTAA
 
Protein sequence
MNMTELATAY PGLMGGMLTT LKVLFLAILG GLSLGTVLAL MRLSGIKALE IPAKLYVNYF 
RSVPLLLVLL WFYFAVPMIY FWVAGKYLQL DTAFTSCVVA FMMFEAAYFS EVVRAGIQSI
GSGQVNAAKA LGMTYGQTMR LIILPQAFRK MLPLILQQCI ILFQDTTLVF AIGLTDFFRA
AYVRGELMGL LTPYILGAGA VYFIISLSAS IGVQQVQKRL RF