Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0336 |
Symbol | |
ID | 4033618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 406657 |
End bp | 407325 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637972785 |
Product | amino acid ABC transporter permease |
Protein accession | YP_579604 |
Protein GI | 93005167 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGA CCGAACTTGC AACTGCCTAT CCCGGTTTGA TGGGTGGCAT GCTGACGACT TTAAAAGTAT TATTTTTAGC AATCTTAGGC GGTCTCAGCT TAGGGACGGT ATTGGCTTTG ATGCGTTTGT CTGGTATCAA AGCACTTGAG ATACCTGCAA AGCTATACGT CAATTATTTC CGTTCTGTGC CATTGCTGCT CGTACTTCTC TGGTTTTATT TTGCCGTACC GATGATTTAT TTTTGGGTCG CTGGTAAATA TCTGCAACTC GATACAGCTT TTACCTCGTG TGTAGTCGCC TTTATGATGT TTGAAGCGGC ATATTTTTCA GAGGTGGTAC GTGCGGGTAT CCAATCTATC GGCAGTGGAC AGGTTAACGC TGCCAAAGCG CTCGGTATGA CCTATGGGCA AACGATGCGC TTGATTATTT TGCCGCAGGC GTTTCGCAAG ATGCTACCGC TGATTTTGCA GCAATGTATT ATTTTATTCC AAGATACGAC ATTGGTTTTT GCAATTGGCT TGACGGATTT TTTCCGCGCC GCTTATGTAC GCGGTGAGCT GATGGGTTTA TTAACGCCCT ATATATTAGG AGCAGGCGCT GTTTATTTTA TTATCAGTTT GAGTGCCTCT ATTGGCGTAC AACAAGTACA AAAGCGTTTA AGATTCTAA
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Protein sequence | MNMTELATAY PGLMGGMLTT LKVLFLAILG GLSLGTVLAL MRLSGIKALE IPAKLYVNYF RSVPLLLVLL WFYFAVPMIY FWVAGKYLQL DTAFTSCVVA FMMFEAAYFS EVVRAGIQSI GSGQVNAAKA LGMTYGQTMR LIILPQAFRK MLPLILQQCI ILFQDTTLVF AIGLTDFFRA AYVRGELMGL LTPYILGAGA VYFIISLSAS IGVQQVQKRL RF
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