Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0335 |
Symbol | |
ID | 4033617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 405914 |
End bp | 406660 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637972784 |
Product | amino acid ABC transporter permease |
Protein accession | YP_579603 |
Protein GI | 93005166 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTATA GCTGGAACTG GGGTGTGCTG TTTGAGCAGA CCGGTATCGG TAGCGAGCTG TATATCCATT GGATGATTAC TGGTCTTGGC TGGTTGTTAT TGATTGGCAG TATTGCATGG GCAATCGCCA TGGTGGTTGG TACTATTTTT GGCATCATGC GTACCTTGCC GAATAAAGGC GCACGTGCTA TCGGTACTGC TTATGTGACG TTTTTCCGCA ATATCCCTTT ATTGGTACAA TTATTTTTCT GGTTTTATAT CGCCCCAGGT TGGCTCACGC CATCCATACA AGAGTGGTGG TATAAAGACT TGTCTCCCAA TACCTCAGCC ATGCTGTCAG CCAGTATCGG TCTTGGTTTA TTTACCGCAG CTCGTATTGT TGAACAAGTA CGTACTGGTA TCGAGTCACT ACCTCAAGGG CAGATCAATG CTGCCTACGC GCTTGGCTTT AGTATCCCGC AAGCCTATAA AGAAGTACTG CTGCCACAAG CGTTTCGGAT TATCTTACCG CCACTGAGCT CAGAGCTGAC CAACTGCTTT AAAAACGCCT CAGTTGCGTC TTTGGTTGGG GTAATGGAGC TGATCAGTCA GACCAAAACC ATCAGTGAAT ATACTCAAAA CAGTCTTGAG ATTTATACCT ATGCGACCAT TATTTATCTG GTGTTTAATC TGTCTTTAAT TGCCATTATG GGGCTAATTG AACGTAAATT GCGTGTGCCT GGGCTAATTG CAGGGAGTCA AAAATGA
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Protein sequence | MNYSWNWGVL FEQTGIGSEL YIHWMITGLG WLLLIGSIAW AIAMVVGTIF GIMRTLPNKG ARAIGTAYVT FFRNIPLLVQ LFFWFYIAPG WLTPSIQEWW YKDLSPNTSA MLSASIGLGL FTAARIVEQV RTGIESLPQG QINAAYALGF SIPQAYKEVL LPQAFRIILP PLSSELTNCF KNASVASLVG VMELISQTKT ISEYTQNSLE IYTYATIIYL VFNLSLIAIM GLIERKLRVP GLIAGSQK
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