Gene Pcryo_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0335 
Symbol 
ID4033617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp405914 
End bp406660 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content45% 
IMG OID637972784 
Productamino acid ABC transporter permease 
Protein accessionYP_579603 
Protein GI93005166 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATA GCTGGAACTG GGGTGTGCTG TTTGAGCAGA CCGGTATCGG TAGCGAGCTG 
TATATCCATT GGATGATTAC TGGTCTTGGC TGGTTGTTAT TGATTGGCAG TATTGCATGG
GCAATCGCCA TGGTGGTTGG TACTATTTTT GGCATCATGC GTACCTTGCC GAATAAAGGC
GCACGTGCTA TCGGTACTGC TTATGTGACG TTTTTCCGCA ATATCCCTTT ATTGGTACAA
TTATTTTTCT GGTTTTATAT CGCCCCAGGT TGGCTCACGC CATCCATACA AGAGTGGTGG
TATAAAGACT TGTCTCCCAA TACCTCAGCC ATGCTGTCAG CCAGTATCGG TCTTGGTTTA
TTTACCGCAG CTCGTATTGT TGAACAAGTA CGTACTGGTA TCGAGTCACT ACCTCAAGGG
CAGATCAATG CTGCCTACGC GCTTGGCTTT AGTATCCCGC AAGCCTATAA AGAAGTACTG
CTGCCACAAG CGTTTCGGAT TATCTTACCG CCACTGAGCT CAGAGCTGAC CAACTGCTTT
AAAAACGCCT CAGTTGCGTC TTTGGTTGGG GTAATGGAGC TGATCAGTCA GACCAAAACC
ATCAGTGAAT ATACTCAAAA CAGTCTTGAG ATTTATACCT ATGCGACCAT TATTTATCTG
GTGTTTAATC TGTCTTTAAT TGCCATTATG GGGCTAATTG AACGTAAATT GCGTGTGCCT
GGGCTAATTG CAGGGAGTCA AAAATGA
 
Protein sequence
MNYSWNWGVL FEQTGIGSEL YIHWMITGLG WLLLIGSIAW AIAMVVGTIF GIMRTLPNKG 
ARAIGTAYVT FFRNIPLLVQ LFFWFYIAPG WLTPSIQEWW YKDLSPNTSA MLSASIGLGL
FTAARIVEQV RTGIESLPQG QINAAYALGF SIPQAYKEVL LPQAFRIILP PLSSELTNCF
KNASVASLVG VMELISQTKT ISEYTQNSLE IYTYATIIYL VFNLSLIAIM GLIERKLRVP
GLIAGSQK