Gene Pcryo_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0325 
Symbol 
ID4034088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp393305 
End bp394105 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content45% 
IMG OID637972774 
Productextracellular solute-binding protein 
Protein accessionYP_579593 
Protein GI93005156 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCGA ATTCTCGCCT ATTATGGTCA TCGATTACCG TTACTGCCGC GCTCATGTTA 
GGTGCGTGTA GCCAACCTGC CAATGACGCT GCTGATACCA ATGCAGATGC ACCGGCAGCA
GGAACCACTG GCAAGACCAT TCGTATTGCG ACTGAAGGCG CATACCCTCC TTTTAACTAT
ACCAATGCCG ATGGCAGTTT GGCGGGTTTC GATATCGACG TTGCCAATGC TCTATGTGAG
CAGATGCAAG CCAAATGTGA AATTGTCGCT CAAGATTGGG ACGGTATTAT TCCGGGTTTA
TTGGCGCAAA AATACGATGC GGTTATCGCT GGTATGTCTA TTACCGCTGA ACGTCAAGAA
AAAGTCGATT TTAGTGAGCC TTACTTTGCC AATACGATGG TTTGGCTGAC CGATACCAAA
GGCAGCTTTG ATCCTAAAGT CATCAAAAAT CTGACGCTTG GTGGTCAACG TTCAACGACA
CCAGGTGCTT ATTTACAAGA CAATTATGAA GGCAAAGATG GCAATACCGT TAAGCTTTAT
GACAATTATG ACAATGCTTA TTTGGACCTG AAGTCTGGTC GTAGTGATGT TGTATTGGCT
GAAAAAGTAT CAGCAAAATC ATGGTTAGCA GACAACCCTG AAGGCTTCGG TATCGTGGGT
GATGAGATTG ACAATGATGA CAATATTGCG ATTGCTGTCC GTAAAGGCGA TGCCATTAAA
GAAGACTTTA ATAAAGCGCT GAATGAAATT CGCAGTAACG GTGAGCTTGC CCGTCTTGAG
CAGCAAAACT TTGGTCAATA A
 
Protein sequence
MMSNSRLLWS SITVTAALML GACSQPANDA ADTNADAPAA GTTGKTIRIA TEGAYPPFNY 
TNADGSLAGF DIDVANALCE QMQAKCEIVA QDWDGIIPGL LAQKYDAVIA GMSITAERQE
KVDFSEPYFA NTMVWLTDTK GSFDPKVIKN LTLGGQRSTT PGAYLQDNYE GKDGNTVKLY
DNYDNAYLDL KSGRSDVVLA EKVSAKSWLA DNPEGFGIVG DEIDNDDNIA IAVRKGDAIK
EDFNKALNEI RSNGELARLE QQNFGQ