Gene Pcryo_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0321 
Symbol 
ID4034084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp389093 
End bp389854 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content43% 
IMG OID637972770 
Productcold-shock DNA-binding domain-containing protein 
Protein accessionYP_579589 
Protein GI93005152 
COG category[F] Nucleotide transport and metabolism
[K] Transcription 
COG ID[COG1278] Cold shock proteins
[COG4290] Guanyl-specific ribonuclease Sa 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0827995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATGC AAAGTGGCAA AATTAAGCAT TGGAATTCTG ATAAAGGCTA TGGCTTTATC 
GATGTCGACA ATCAGAGTGA AGATGTGTTT TTTCACATAA AATCCGTGCG AATGGCGCAG
CCTATCAGCA AAGGGCAACG TGTCTATTTT AATAGTGAAC GCAATGACAA AAACCAATTG
CGCGCCACCG AAGTCACATC GGATGAATTG AGTATTTTAG AGACGCCAGC GTCCAATTCA
GTGGCAAATT CAATGCATCG CAGCTCAGAT AATGTTAGTC AGAAAAACAA TCAAAACCAC
ATTAGCAAAA ATAATCGTAG CAGCCAGAAT AAGAAAAGCA GCTTCTCTAC CCTATTCAGT
TTGATTGCCA TTATCGCTGT TGCGGTCTAT TTCTTTGCTG ATTTGAAATC CAGTTTTTTT
GCCGATAGCG CGCCATCTAT TACTCTATCG CAAAATCATA TTGAATCTGC CAGTAATTCA
AATGCAGCGG CTATCACTGG TGATGCGCAA ATAGATCAGA CGCTTGTGCT TATCAAGCAA
GGTGGACCCT TTCCTTATCC TAACAAAGAC GGAACCACTT TCTATAATCG CGAAGGCAAG
TTACCGGCGC AGTCGCAAGG CTACTATCGC GAATATACTG TACCCACACC TGCCGTTTCG
CATCGCGGCG CACGGCGTAT TGTCACTGGT GGTCACCCAC CAACCATTTA TTATTTAACC
CTTGATCATT ACGACAGCTT TCAAAAACTG GAGGTGAAAT AA
 
Protein sequence
MPMQSGKIKH WNSDKGYGFI DVDNQSEDVF FHIKSVRMAQ PISKGQRVYF NSERNDKNQL 
RATEVTSDEL SILETPASNS VANSMHRSSD NVSQKNNQNH ISKNNRSSQN KKSSFSTLFS
LIAIIAVAVY FFADLKSSFF ADSAPSITLS QNHIESASNS NAAAITGDAQ IDQTLVLIKQ
GGPFPYPNKD GTTFYNREGK LPAQSQGYYR EYTVPTPAVS HRGARRIVTG GHPPTIYYLT
LDHYDSFQKL EVK