Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0321 |
Symbol | |
ID | 4034084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 389093 |
End bp | 389854 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637972770 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_579589 |
Protein GI | 93005152 |
COG category | [F] Nucleotide transport and metabolism [K] Transcription |
COG ID | [COG1278] Cold shock proteins [COG4290] Guanyl-specific ribonuclease Sa |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0827995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATGC AAAGTGGCAA AATTAAGCAT TGGAATTCTG ATAAAGGCTA TGGCTTTATC GATGTCGACA ATCAGAGTGA AGATGTGTTT TTTCACATAA AATCCGTGCG AATGGCGCAG CCTATCAGCA AAGGGCAACG TGTCTATTTT AATAGTGAAC GCAATGACAA AAACCAATTG CGCGCCACCG AAGTCACATC GGATGAATTG AGTATTTTAG AGACGCCAGC GTCCAATTCA GTGGCAAATT CAATGCATCG CAGCTCAGAT AATGTTAGTC AGAAAAACAA TCAAAACCAC ATTAGCAAAA ATAATCGTAG CAGCCAGAAT AAGAAAAGCA GCTTCTCTAC CCTATTCAGT TTGATTGCCA TTATCGCTGT TGCGGTCTAT TTCTTTGCTG ATTTGAAATC CAGTTTTTTT GCCGATAGCG CGCCATCTAT TACTCTATCG CAAAATCATA TTGAATCTGC CAGTAATTCA AATGCAGCGG CTATCACTGG TGATGCGCAA ATAGATCAGA CGCTTGTGCT TATCAAGCAA GGTGGACCCT TTCCTTATCC TAACAAAGAC GGAACCACTT TCTATAATCG CGAAGGCAAG TTACCGGCGC AGTCGCAAGG CTACTATCGC GAATATACTG TACCCACACC TGCCGTTTCG CATCGCGGCG CACGGCGTAT TGTCACTGGT GGTCACCCAC CAACCATTTA TTATTTAACC CTTGATCATT ACGACAGCTT TCAAAAACTG GAGGTGAAAT AA
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Protein sequence | MPMQSGKIKH WNSDKGYGFI DVDNQSEDVF FHIKSVRMAQ PISKGQRVYF NSERNDKNQL RATEVTSDEL SILETPASNS VANSMHRSSD NVSQKNNQNH ISKNNRSSQN KKSSFSTLFS LIAIIAVAVY FFADLKSSFF ADSAPSITLS QNHIESASNS NAAAITGDAQ IDQTLVLIKQ GGPFPYPNKD GTTFYNREGK LPAQSQGYYR EYTVPTPAVS HRGARRIVTG GHPPTIYYLT LDHYDSFQKL EVK
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