Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0318 |
Symbol | glyA |
ID | 4034081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 385995 |
End bp | 387251 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637972767 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_579586 |
Protein GI | 93005149 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAG ATATCTCTAT CAAAGATTTT GATCCAGTAC TTGCTGAAGC TATGGCTGCT GAAAGCGTTC GTCAAGAGAA CCATATTGAG CTTATCGCTT CAGAAAACTA CTGCTCACAA GCAGTGATGG AAGCGCAGGG TACTGATTTG ACCAACAAAT ACGCTGAAGG CTATCCTGGT AAGCGCTATT ACGGTGGTTG TGAGCATGTT GACGTCGTTG AGCAACTAGC TATTGACCGT GCAAAAGAAT TGTTTGGTGC AGAATATGTG AACGTACAGC CACACTCTGG TAGCCAAGCA AACTCTGCTG TCTTTTTAGC ATTGCTTGAA GCCAATGATA CTGTGCTTGG CATGAGTTTA GATGCTGGTG GTCACTTAAC GCATGGCGCA CATATCAACT TCTCAGGTCT AAACTACAAT GCAGTACAGT ATGGTTTGGT CGAAGGCACT GGTCTTATCG ATTATGACCA AGTTGAGAGC TTGGCAAAAG AGCATAAGCC TAAAATGATC ATCGCTGGTT TTTCAGCGTA TTCACAAGTA GTTGATTGGG CGCGTTTCCG TGAAATCGCT GACGAAGTAG GCGCTTACTT ACTAGTCGAT ATGGCTCACG TTGCTGGTCT TATCGCTGGC GGCGTTTACC CAAGCCCAGT ACCATTTGCT GATGTAGTGA CCACGACTAC GCACAAAACC TTACGTGGCC CACGTTCAGG TATGATTCTT GCTCGTGATG AAGTACTTGC TAAAAAGCTC AATTCTGCCG TATTCCCAGG TAACCAAGGT GGCCCGTTGA TGCATGTCAT CGCGGCAAAA GCAGTTTGCT TTAAAGAAGC ATTAGAAGAG AACTTCAAAA CCTATCAGCA GCAAGTGGTT AAAAACGCTC AAGCCATGGC GAAAGTCATT CAAGATCGCG GCTACGAAAT TATCTCTGGT GGCACTGAAA ACCATCTGAT GCTTATCAGC TTAGTTAAGC AAGAGATGAC CGGTAAAGAA GCGGATAAAT GGTTGGGTGA CGCACACATT ACGGTCAATA AAAACGCCGT ACCAAACGAT CCAAAATCTC CGTTTGTGAC TTCTGGTATC CGTATTGGTA CACCAGCGAT TACCACTCGC GGCTTCAACG AAGCACAAGC AGGTGATTTG GCAGGTTGGA TTTGTGATGT TCTTGACAGC CGTGGCGATG AAGCAGTGAC TGCTGAAGTA CGTGGCAAAG TAGAAGCGAT CTGTAAAGAG CTTCCTGTCT ATGCTAAAAA CCAGTAA
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Protein sequence | MFKDISIKDF DPVLAEAMAA ESVRQENHIE LIASENYCSQ AVMEAQGTDL TNKYAEGYPG KRYYGGCEHV DVVEQLAIDR AKELFGAEYV NVQPHSGSQA NSAVFLALLE ANDTVLGMSL DAGGHLTHGA HINFSGLNYN AVQYGLVEGT GLIDYDQVES LAKEHKPKMI IAGFSAYSQV VDWARFREIA DEVGAYLLVD MAHVAGLIAG GVYPSPVPFA DVVTTTTHKT LRGPRSGMIL ARDEVLAKKL NSAVFPGNQG GPLMHVIAAK AVCFKEALEE NFKTYQQQVV KNAQAMAKVI QDRGYEIISG GTENHLMLIS LVKQEMTGKE ADKWLGDAHI TVNKNAVPND PKSPFVTSGI RIGTPAITTR GFNEAQAGDL AGWICDVLDS RGDEAVTAEV RGKVEAICKE LPVYAKNQ
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