Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0315 |
Symbol | |
ID | 4034078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 380810 |
End bp | 383029 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637972764 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_579583 |
Protein GI | 93005146 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.789094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAA TTATTTATAC AAAAACCGAC GAAGCCCCAG CGCTTGCAAC CGTATCATTC TTGCCTATTG TCAAAGCATT TACTCACACA GCAGGCATTG AAGTTGACAC CAGTGATATC TCAGTTGCTG CGCGTGTATT GGCTGAATTC CCTGAGTTTT TAAGTGAAGA GCAACGCGTT CCTGATAACT TAGCTGAGCT AGGTCGTCTG ACACAAGATC CAAACACCAA CATCATTAAA CTGCCAAATA TCAGTGCTTC TGTTCAACAG TTGAAAGCAG CTATTAAAGA GCTACAAGGT AAAGGCTACG CTATTCCTGA TTTTCCAGAT GACCCAAAAA CTGACGAAGA AAAATCGATT CGTCTGCGTT ATGGCAAAAG TCTAGGCAGC TCGGTAAACC CTGTACTTCG TGAAGGTAAC TCAGATCGCC GCGCACCAAA AGCGGTCAAA AACTACGCAC GCAAACATCC GCATTCTATG GGTGAATGGA AACAATGGTC ACAAACGCAT GTATCACATA TGCACAGCGG CGACTTCTAT GATGGCGAGC AATCTATCAC TTTAGATAAA GCGCGTACTG TACGTATGGA ACGCTTAGCG GACGATGGCA CTGTAAATGT ATTCAAAACA GGCATCGCTT TGCTTGATAA AGAAGTCATC GATCTTATGT TTATGAGCAA AAAATCACTG CTTGATTTTT ATGAGCGTGA AATGGAAGAC TGCCGTGAAG CTGGTATCTT ATTCTCGTTG CACGTAAAAG CGACCATGAT GAAAGTATCA CACCCTATCG TCTTCGGTCA TGCGGTCAGA ATCTACTATA AAGATGCTTT CCAAAAGCAT GGCGCATTAT TTGACGAGCT AGGTGTCAAT GTTAATAACG GCATGGCAAG TTTGTATGAA AAAATTGCCG AGTTGCCAGC CAGTTTGCGT GAAGAGATTG AGCGTGATCT ACATGCTTGC CAAGTCCACC GCCCACGTTT GGCGATGGTT GATTCATCAA AAGGCATCAC CAACTTCCAT TCGCCAAGTG ACATCATCGT TGATGCATCC ATGCCAGCTA TGATTCGTAA CGGCGGAAAA ATGTGGGGTG CTGATGGTAA ACTATATGAC TGTAAAGCTG TCATGCCAGA ATCTACCTTT GCCCGCATTT ATCAAGAAAT GATCAATTTC TGCAAATGGC ATGGCAACTT TGATCCAACA ACGATGGGTA CAGTACCTAA CGTCGGTCTA ATGGCTCAAA AAGCGGAAGA ATATGGCTCA CACGACAAGA CTTTTGAAGC GAGCGATAAC GGTATTGCTC GTATTGTTGA CGAAGAAACA AATGAAATCT TGCTTGAGCA GCGTGTTGAA AAAGGTGATA TCTGGCGCAT GTGTCAGGTT AAAGATGAGC CTATCCAAGA TTGGGTCAAG CTTGCAGTAC GCCGTGCACG CGAATCGAAT ACACCAGTTA TCTTTTGGTT AGACCCGTAT CGTCCACACG AAAACGAGCT GATCAAAAAG GTAAAAATGT ATTTAAAAGA TCATGATACC ACTGGTCTAC ATATCGAAAC CATGTCACAA GTTCGTGCCA TGCGTTATAC CTTAGAGCGC GTTGCTCGTG GTCTTGATAC GATTTCTGCT ACTGGTAATA TCTTACGTGA TTATCTCACT GACTTATTCC CGATTTTAGA ATTGGGCACC AGTGCTAAGA TGTTGTCAGT GGTTCCATTA ATGAAGGGCG GCGGTTTGTT TGAAACAGGC GCTGGCGGTT CAGCACCAAA GCATGTACAA CAATTGGTTG AAGAAAACCA CTTACGTTGG GATTCTTTGG GTGAGTTCTT GGCATTGACT GTGTCGCTAG AGCATTTAGC ACAGAATGAC AACAACCCTA AAGCTCAGGT ATTGGCTGAT ACCTTAGATA GAGCAACTGA AAAGCTGTTA TTGAATGACA AGTCTCCATC ACGCAAAACT GGTGAGCTTG ACAATCGTGG CAGTCACTTC TATCTTGCGA TGTATTGGGC ACAAGAGCTT GCCGCTCAAG AGCAAGACGG CGAGCTAAAA GCACAATTTA CCGCACTTGC GCAGAATCTT GAGAGCAATG AAGCAGCTAT TATCAAAGAG CTAAATGATG CTCAAGGTAA GCCTATGGAT CTTAAAGGCT ATTACCTAGC GGATGAAGCA TTGGCTGAGC AAGCAATGCG TCCTAGCACT TTGTTCAATA ACGCCATTGC TTCATTATAA
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Protein sequence | MSKIIYTKTD EAPALATVSF LPIVKAFTHT AGIEVDTSDI SVAARVLAEF PEFLSEEQRV PDNLAELGRL TQDPNTNIIK LPNISASVQQ LKAAIKELQG KGYAIPDFPD DPKTDEEKSI RLRYGKSLGS SVNPVLREGN SDRRAPKAVK NYARKHPHSM GEWKQWSQTH VSHMHSGDFY DGEQSITLDK ARTVRMERLA DDGTVNVFKT GIALLDKEVI DLMFMSKKSL LDFYEREMED CREAGILFSL HVKATMMKVS HPIVFGHAVR IYYKDAFQKH GALFDELGVN VNNGMASLYE KIAELPASLR EEIERDLHAC QVHRPRLAMV DSSKGITNFH SPSDIIVDAS MPAMIRNGGK MWGADGKLYD CKAVMPESTF ARIYQEMINF CKWHGNFDPT TMGTVPNVGL MAQKAEEYGS HDKTFEASDN GIARIVDEET NEILLEQRVE KGDIWRMCQV KDEPIQDWVK LAVRRARESN TPVIFWLDPY RPHENELIKK VKMYLKDHDT TGLHIETMSQ VRAMRYTLER VARGLDTISA TGNILRDYLT DLFPILELGT SAKMLSVVPL MKGGGLFETG AGGSAPKHVQ QLVEENHLRW DSLGEFLALT VSLEHLAQND NNPKAQVLAD TLDRATEKLL LNDKSPSRKT GELDNRGSHF YLAMYWAQEL AAQEQDGELK AQFTALAQNL ESNEAAIIKE LNDAQGKPMD LKGYYLADEA LAEQAMRPST LFNNAIASL
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