Gene Pcryo_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0315 
Symbol 
ID4034078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp380810 
End bp383029 
Gene Length2220 bp 
Protein Length739 aa 
Translation table11 
GC content44% 
IMG OID637972764 
Productisocitrate dehydrogenase, NADP-dependent 
Protein accessionYP_579583 
Protein GI93005146 
COG category[C] Energy production and conversion 
COG ID[COG2838] Monomeric isocitrate dehydrogenase 
TIGRFAM ID[TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.789094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAA TTATTTATAC AAAAACCGAC GAAGCCCCAG CGCTTGCAAC CGTATCATTC 
TTGCCTATTG TCAAAGCATT TACTCACACA GCAGGCATTG AAGTTGACAC CAGTGATATC
TCAGTTGCTG CGCGTGTATT GGCTGAATTC CCTGAGTTTT TAAGTGAAGA GCAACGCGTT
CCTGATAACT TAGCTGAGCT AGGTCGTCTG ACACAAGATC CAAACACCAA CATCATTAAA
CTGCCAAATA TCAGTGCTTC TGTTCAACAG TTGAAAGCAG CTATTAAAGA GCTACAAGGT
AAAGGCTACG CTATTCCTGA TTTTCCAGAT GACCCAAAAA CTGACGAAGA AAAATCGATT
CGTCTGCGTT ATGGCAAAAG TCTAGGCAGC TCGGTAAACC CTGTACTTCG TGAAGGTAAC
TCAGATCGCC GCGCACCAAA AGCGGTCAAA AACTACGCAC GCAAACATCC GCATTCTATG
GGTGAATGGA AACAATGGTC ACAAACGCAT GTATCACATA TGCACAGCGG CGACTTCTAT
GATGGCGAGC AATCTATCAC TTTAGATAAA GCGCGTACTG TACGTATGGA ACGCTTAGCG
GACGATGGCA CTGTAAATGT ATTCAAAACA GGCATCGCTT TGCTTGATAA AGAAGTCATC
GATCTTATGT TTATGAGCAA AAAATCACTG CTTGATTTTT ATGAGCGTGA AATGGAAGAC
TGCCGTGAAG CTGGTATCTT ATTCTCGTTG CACGTAAAAG CGACCATGAT GAAAGTATCA
CACCCTATCG TCTTCGGTCA TGCGGTCAGA ATCTACTATA AAGATGCTTT CCAAAAGCAT
GGCGCATTAT TTGACGAGCT AGGTGTCAAT GTTAATAACG GCATGGCAAG TTTGTATGAA
AAAATTGCCG AGTTGCCAGC CAGTTTGCGT GAAGAGATTG AGCGTGATCT ACATGCTTGC
CAAGTCCACC GCCCACGTTT GGCGATGGTT GATTCATCAA AAGGCATCAC CAACTTCCAT
TCGCCAAGTG ACATCATCGT TGATGCATCC ATGCCAGCTA TGATTCGTAA CGGCGGAAAA
ATGTGGGGTG CTGATGGTAA ACTATATGAC TGTAAAGCTG TCATGCCAGA ATCTACCTTT
GCCCGCATTT ATCAAGAAAT GATCAATTTC TGCAAATGGC ATGGCAACTT TGATCCAACA
ACGATGGGTA CAGTACCTAA CGTCGGTCTA ATGGCTCAAA AAGCGGAAGA ATATGGCTCA
CACGACAAGA CTTTTGAAGC GAGCGATAAC GGTATTGCTC GTATTGTTGA CGAAGAAACA
AATGAAATCT TGCTTGAGCA GCGTGTTGAA AAAGGTGATA TCTGGCGCAT GTGTCAGGTT
AAAGATGAGC CTATCCAAGA TTGGGTCAAG CTTGCAGTAC GCCGTGCACG CGAATCGAAT
ACACCAGTTA TCTTTTGGTT AGACCCGTAT CGTCCACACG AAAACGAGCT GATCAAAAAG
GTAAAAATGT ATTTAAAAGA TCATGATACC ACTGGTCTAC ATATCGAAAC CATGTCACAA
GTTCGTGCCA TGCGTTATAC CTTAGAGCGC GTTGCTCGTG GTCTTGATAC GATTTCTGCT
ACTGGTAATA TCTTACGTGA TTATCTCACT GACTTATTCC CGATTTTAGA ATTGGGCACC
AGTGCTAAGA TGTTGTCAGT GGTTCCATTA ATGAAGGGCG GCGGTTTGTT TGAAACAGGC
GCTGGCGGTT CAGCACCAAA GCATGTACAA CAATTGGTTG AAGAAAACCA CTTACGTTGG
GATTCTTTGG GTGAGTTCTT GGCATTGACT GTGTCGCTAG AGCATTTAGC ACAGAATGAC
AACAACCCTA AAGCTCAGGT ATTGGCTGAT ACCTTAGATA GAGCAACTGA AAAGCTGTTA
TTGAATGACA AGTCTCCATC ACGCAAAACT GGTGAGCTTG ACAATCGTGG CAGTCACTTC
TATCTTGCGA TGTATTGGGC ACAAGAGCTT GCCGCTCAAG AGCAAGACGG CGAGCTAAAA
GCACAATTTA CCGCACTTGC GCAGAATCTT GAGAGCAATG AAGCAGCTAT TATCAAAGAG
CTAAATGATG CTCAAGGTAA GCCTATGGAT CTTAAAGGCT ATTACCTAGC GGATGAAGCA
TTGGCTGAGC AAGCAATGCG TCCTAGCACT TTGTTCAATA ACGCCATTGC TTCATTATAA
 
Protein sequence
MSKIIYTKTD EAPALATVSF LPIVKAFTHT AGIEVDTSDI SVAARVLAEF PEFLSEEQRV 
PDNLAELGRL TQDPNTNIIK LPNISASVQQ LKAAIKELQG KGYAIPDFPD DPKTDEEKSI
RLRYGKSLGS SVNPVLREGN SDRRAPKAVK NYARKHPHSM GEWKQWSQTH VSHMHSGDFY
DGEQSITLDK ARTVRMERLA DDGTVNVFKT GIALLDKEVI DLMFMSKKSL LDFYEREMED
CREAGILFSL HVKATMMKVS HPIVFGHAVR IYYKDAFQKH GALFDELGVN VNNGMASLYE
KIAELPASLR EEIERDLHAC QVHRPRLAMV DSSKGITNFH SPSDIIVDAS MPAMIRNGGK
MWGADGKLYD CKAVMPESTF ARIYQEMINF CKWHGNFDPT TMGTVPNVGL MAQKAEEYGS
HDKTFEASDN GIARIVDEET NEILLEQRVE KGDIWRMCQV KDEPIQDWVK LAVRRARESN
TPVIFWLDPY RPHENELIKK VKMYLKDHDT TGLHIETMSQ VRAMRYTLER VARGLDTISA
TGNILRDYLT DLFPILELGT SAKMLSVVPL MKGGGLFETG AGGSAPKHVQ QLVEENHLRW
DSLGEFLALT VSLEHLAQND NNPKAQVLAD TLDRATEKLL LNDKSPSRKT GELDNRGSHF
YLAMYWAQEL AAQEQDGELK AQFTALAQNL ESNEAAIIKE LNDAQGKPMD LKGYYLADEA
LAEQAMRPST LFNNAIASL