Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0308 |
Symbol | |
ID | 4034518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 370449 |
End bp | 371531 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637972757 |
Product | beta-hexosaminidase |
Protein accession | YP_579576 |
Protein GI | 93005139 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.446956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGGCG TTTTAATGAT TGATATCGAT AGTACCGCGC TGACGGCTGA AGATGTCAGC TTAATTAGAC AAGCACAAGT TGGTGGGGTC ATATTATTCG CCAGAAACGT CACCGATGCC GCCCAAGTGC GCGCGCTGTG TGACGATATA CGTTGTCACA ATGCTGACAT TCTGATTGGG GTCGATCAAG AAGGCGGACG CGTTGCCAGA TTGCGTAACG GTTTTACGCC ACTGCCAGCA ATGGGAAGAC TTGGTGAATT ATTTAACCAA GACCCCAATC GCGCTCTAGA CTGTGCATAT GATTGTGGTT ATTTGATGGC ATCAGAAGTA TTAGCAGCGG GCATTGATTT AAGCTTTGCA CCGGTGCTCG ATAGAGATGG TATCAGCCAA GTTATCGGTG ATCGCAGCTT CCACCATGAG CCGCAAGCTA TCACTGCTTT GGCAGCACAA TTTATGCGCG GTATGAAAGC CGCTGGGATG GCAACGACGG GCAAGCATTT CCCTGGTCAC GGTGCAATAG CCCCCGACTC GCATGTTGCT GAAGCCATCG ATGATCGTAG CTTAGATGAG ATTATGAACA GTGATATGCA GCCATTTGCG CAAACGTTGC CTTGGCTTGA TGCTTTGATG CCAGCACATG TGATTTTTTC GCAAGTAGAT AATAAACCAG CGGGTTTTTC TAAGATTTGG CTCAAAGACA TTATTCGTGA GCAGCTAAAT TTTGACGGGG TATTGTTTTC TGATGACTTG TCTATGGCAG GGGCAAAAGC TGCGGGTGAT GTCAGTGCGC GCGTCAAAGC AGCGATCGAA GCTGGCTGCG ATATTGCTTT GGTTTGTAAT GATCGCGTCG CGGCTCATGA AGCAGCAAAA GCGGCGCAAG AGCTGCCCTA TCCCAATCAA AAACGCATCA AAACCATGTG TGGACAGATA CCCGCTTGGC AAGGCGACCT TGAATCGACT TGTCAGCAGT TTGACTATTG GCAACAAGCA AAAGAAAATA TCTCGCAGAC GTTCTTTCCT ACTGCATTAG ACTCTAAGGC ATCCGCTAAT CTTGAGCTAA GAGACCCAAC AAGTTACATC TAA
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Protein sequence | MYGVLMIDID STALTAEDVS LIRQAQVGGV ILFARNVTDA AQVRALCDDI RCHNADILIG VDQEGGRVAR LRNGFTPLPA MGRLGELFNQ DPNRALDCAY DCGYLMASEV LAAGIDLSFA PVLDRDGISQ VIGDRSFHHE PQAITALAAQ FMRGMKAAGM ATTGKHFPGH GAIAPDSHVA EAIDDRSLDE IMNSDMQPFA QTLPWLDALM PAHVIFSQVD NKPAGFSKIW LKDIIREQLN FDGVLFSDDL SMAGAKAAGD VSARVKAAIE AGCDIALVCN DRVAAHEAAK AAQELPYPNQ KRIKTMCGQI PAWQGDLEST CQQFDYWQQA KENISQTFFP TALDSKASAN LELRDPTSYI
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