Gene Pcryo_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0308 
Symbol 
ID4034518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp370449 
End bp371531 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content48% 
IMG OID637972757 
Productbeta-hexosaminidase 
Protein accessionYP_579576 
Protein GI93005139 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.446956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGGCG TTTTAATGAT TGATATCGAT AGTACCGCGC TGACGGCTGA AGATGTCAGC 
TTAATTAGAC AAGCACAAGT TGGTGGGGTC ATATTATTCG CCAGAAACGT CACCGATGCC
GCCCAAGTGC GCGCGCTGTG TGACGATATA CGTTGTCACA ATGCTGACAT TCTGATTGGG
GTCGATCAAG AAGGCGGACG CGTTGCCAGA TTGCGTAACG GTTTTACGCC ACTGCCAGCA
ATGGGAAGAC TTGGTGAATT ATTTAACCAA GACCCCAATC GCGCTCTAGA CTGTGCATAT
GATTGTGGTT ATTTGATGGC ATCAGAAGTA TTAGCAGCGG GCATTGATTT AAGCTTTGCA
CCGGTGCTCG ATAGAGATGG TATCAGCCAA GTTATCGGTG ATCGCAGCTT CCACCATGAG
CCGCAAGCTA TCACTGCTTT GGCAGCACAA TTTATGCGCG GTATGAAAGC CGCTGGGATG
GCAACGACGG GCAAGCATTT CCCTGGTCAC GGTGCAATAG CCCCCGACTC GCATGTTGCT
GAAGCCATCG ATGATCGTAG CTTAGATGAG ATTATGAACA GTGATATGCA GCCATTTGCG
CAAACGTTGC CTTGGCTTGA TGCTTTGATG CCAGCACATG TGATTTTTTC GCAAGTAGAT
AATAAACCAG CGGGTTTTTC TAAGATTTGG CTCAAAGACA TTATTCGTGA GCAGCTAAAT
TTTGACGGGG TATTGTTTTC TGATGACTTG TCTATGGCAG GGGCAAAAGC TGCGGGTGAT
GTCAGTGCGC GCGTCAAAGC AGCGATCGAA GCTGGCTGCG ATATTGCTTT GGTTTGTAAT
GATCGCGTCG CGGCTCATGA AGCAGCAAAA GCGGCGCAAG AGCTGCCCTA TCCCAATCAA
AAACGCATCA AAACCATGTG TGGACAGATA CCCGCTTGGC AAGGCGACCT TGAATCGACT
TGTCAGCAGT TTGACTATTG GCAACAAGCA AAAGAAAATA TCTCGCAGAC GTTCTTTCCT
ACTGCATTAG ACTCTAAGGC ATCCGCTAAT CTTGAGCTAA GAGACCCAAC AAGTTACATC
TAA
 
Protein sequence
MYGVLMIDID STALTAEDVS LIRQAQVGGV ILFARNVTDA AQVRALCDDI RCHNADILIG 
VDQEGGRVAR LRNGFTPLPA MGRLGELFNQ DPNRALDCAY DCGYLMASEV LAAGIDLSFA
PVLDRDGISQ VIGDRSFHHE PQAITALAAQ FMRGMKAAGM ATTGKHFPGH GAIAPDSHVA
EAIDDRSLDE IMNSDMQPFA QTLPWLDALM PAHVIFSQVD NKPAGFSKIW LKDIIREQLN
FDGVLFSDDL SMAGAKAAGD VSARVKAAIE AGCDIALVCN DRVAAHEAAK AAQELPYPNQ
KRIKTMCGQI PAWQGDLEST CQQFDYWQQA KENISQTFFP TALDSKASAN LELRDPTSYI