Gene Pcryo_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0307 
Symbol 
ID4034517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp368732 
End bp370333 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content47% 
IMG OID637972756 
ProductOmpA/MotB 
Protein accessionYP_579575 
Protein GI93005138 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTA TCAGTCATTT GACACGGACA GTCAGTCCAG CGGTACTTGG AGACGATCAC 
AATCCCGCCA AGAAAAATTT ACTTGAACAG TTCTATGCTA TTTTTGCGGC GCGTCTAGCA
AACAATCAGA CCCATGACCG TTTTGCCAAT GAAACGATTG CTCGTGATGA TCAAGGTTTT
TATGATCGTG TATGGACAGA AGACGCACAT CGCGATCAAA TCGCTCGCGA GCTTGCTGGT
AAGCATAACG TCGATGTTAC GGCTGCTCGT GGCTTAATTG CCATGGCAGC ACCGCTTGCT
TATCATGAAA TCAAAAGTTT GGCGGGCACG ACGCCAGTAC CGCAATTTTT AAACGAAAAT
ATTGACAGTT ATCAGCGTCA TATTCCCGTA TGGGCAACGG CTGTATTGCC TGTTGGCGTG
ATTGCTGCTG CTCCTGTTTC TACTGGTACA CATATATCAG ATACTGTGAG CACCGCGCCG
CTACAGCGCG AAGCAGAAAA AGATGGCAGC TTTATGAAGG CGCTGTTACC TATTATTGGA
TTGATTATTT TAGGGGCTTT AGCTTGGGCG CTATTAAGAG GCTGTCAAGA TAAGCCTGAG
CCGGTCGGCA AGCCTGTTGT GACAGAGCAA CAAGCCGCGG ATAGTGATGG GCAGGCAGTT
GCAGGTGATA TTACACCAGC ATCCTTGCGT ATTGCTACTG GTGAAGATAG TGAGCTATAT
GCATGTCGTA TGGATGTGGG TAATGACACG CTACAGAGCA ATGTCATGAC TGCGCTGACT
GGCGTGTTTG GTGATGCCGC CAATAATTGC CGTGCAGATG TCGATGATAA TTTCTCCATT
GATATGCCAG CGACTGCGCA GCTTGCCACT ATTTTACCTA TTTTTAAAAA TGTCCCAAAT
GCCAGTATGT TGGTCAAAGG CGATACGATT ACGGTCAATG CTGCTGATAC TGCCGCTTTA
ACCAAATTGG TATCTGATTT ACAAGCTGCT GCGCCAGCGA TGACAGTTAT TGCTGAAGGT
CCACTGAATG AGCAAACTGA GATTGCTGAT AGCTTAACAG CGTCTGAGGC GGCAATGGAT
AACTTGGGTC AGAACCCCGA TCCTCGTGAT GTCGCGCGCG CCTTAAGTCT ACAAGTGGTC
AATTTCGAAG TAGATAAAGC GGTGATTCCT GACGCCAATA AAGCGCTATT AGATCGCGCT
GTGAAGCTAA TGGAGCAAGT GCCCAATATG ACACTGATGA TTATTGGTCA CACTGACAAA
ACAGCAGATG CTGCTTATAA TCTAAAGCTA TCAGAAGAGC GTGCGCAGGC TATGAAGGCG
TATTTGGTCG CGCAAGGTGT TGATCCCAGC AAGCTTATGA CCAAAGGTAT GGGTGAGACC
GATCCTATAG CGGACAATAC GACAGACCAA GGTCGTTTCC GTAACCGCCG TATCGAGTTT
GTGGTCTATG ACGAAACGGC TACGGCCAAT GATGGCTTAG CGATTAATAG TGATGCGCTT
GATCCAGACC TAAATCCATT AGACAGCGAC AACGATGATT TAATGCCAGA TGCTGATGAT
GCTAGCCGTG GTACAGCATT GGATCCAGCT GCAACCAATT AA
 
Protein sequence
MDIISHLTRT VSPAVLGDDH NPAKKNLLEQ FYAIFAARLA NNQTHDRFAN ETIARDDQGF 
YDRVWTEDAH RDQIARELAG KHNVDVTAAR GLIAMAAPLA YHEIKSLAGT TPVPQFLNEN
IDSYQRHIPV WATAVLPVGV IAAAPVSTGT HISDTVSTAP LQREAEKDGS FMKALLPIIG
LIILGALAWA LLRGCQDKPE PVGKPVVTEQ QAADSDGQAV AGDITPASLR IATGEDSELY
ACRMDVGNDT LQSNVMTALT GVFGDAANNC RADVDDNFSI DMPATAQLAT ILPIFKNVPN
ASMLVKGDTI TVNAADTAAL TKLVSDLQAA APAMTVIAEG PLNEQTEIAD SLTASEAAMD
NLGQNPDPRD VARALSLQVV NFEVDKAVIP DANKALLDRA VKLMEQVPNM TLMIIGHTDK
TADAAYNLKL SEERAQAMKA YLVAQGVDPS KLMTKGMGET DPIADNTTDQ GRFRNRRIEF
VVYDETATAN DGLAINSDAL DPDLNPLDSD NDDLMPDADD ASRGTALDPA ATN