| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0283 |
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| Symbol | |
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| ID | 4035615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 342361 |
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| End bp | 343392 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637972732 |
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| Product | pseudouridine synthase, RluD |
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| Protein accession | YP_579551 |
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| Protein GI | 93005114 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.131037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAACT CAAAAATGAC AAACGACGAA CCTATCCACG AAGCGCCAGC TATCTTTAAT
AGCAAAACGC GCCCACAAAG TGCTGACGAT GAGATTAGCA ACTTCGGCAA GGTCAATTAC
CTTGAAGTCA CGCGTCATCA GCACGACCAG CGCTTGGATA ACTTTTTGCT TAATCGCTTA
AAAGGTTTGC CAAAACCGCA TATCTATAAA ATGATTCGCT CAGATGAGAT TCGCGTCAAT
AACAAGCGCT GCAAGGCTCA TGACAGAGTG CAGCGTGAAG ACGTGGTACG TATTGCGCCA
GTGGTACTTG CCACTCGTGA AAAACCTATC ATCAGTACCG AATTTGCCAA AAGCTTATTG
GCGCGTGTGG TCTATGAGGA TGAAGGTTTG ATCGTGCTTA ATAAACCATC CGGTATTGCG
GTTCATGGCG GTAGTGGTCT TGCATTTGGT GTCATTGAAG CCATGCGTGA AGTCACAGGC
AAGAAGTATT TAGAGCTGGT GCATCGTATC GATAAAGATA CTTCAGGTTT ATTAATGATC
TCTAAAAAAC GCTCTGCACT TAAAGTATTG CAGCAACATC TGGTCGACAA AACCATTCAA
AAGCATTATT TATGTATTGC AAAAGGTCAG CCTGCACTTA ACGAACAACG TATCGATGCG
TCATTGTTGC GTTATACACT GGCAAGCGGT GAGCGCCGCG TTAAGGTAGA TACACAAGAC
CCGCAAACCA AAGAGAGTCA GACTGATATC GTCGTTCATG GTCGTTTTAT GATTGCTGAG
CAGCCCGTTA GCTTGATTGA AGCCAAGCCG CTCACCGGAC GTACCCATCA AATTCGTGTA
CATTTGGCGC ACATTGGTCA TGCTATCTTG GGCGATGATA AGTACCATGT ACATGATAAA
TCTGGTGTGC ATCGTCTATG CTTACATGCG TGGCGTCTAG ATATACCTGG TTATGAGACT
ATCACTGCGC CTTTACCAGA AGAGATGCTC GACTGGATGC CAGAAGAGAT TAAAGCCAAT
TTGCCTAAAT AA
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| Protein sequence | MTNSKMTNDE PIHEAPAIFN SKTRPQSADD EISNFGKVNY LEVTRHQHDQ RLDNFLLNRL
KGLPKPHIYK MIRSDEIRVN NKRCKAHDRV QREDVVRIAP VVLATREKPI ISTEFAKSLL
ARVVYEDEGL IVLNKPSGIA VHGGSGLAFG VIEAMREVTG KKYLELVHRI DKDTSGLLMI
SKKRSALKVL QQHLVDKTIQ KHYLCIAKGQ PALNEQRIDA SLLRYTLASG ERRVKVDTQD
PQTKESQTDI VVHGRFMIAE QPVSLIEAKP LTGRTHQIRV HLAHIGHAIL GDDKYHVHDK
SGVHRLCLHA WRLDIPGYET ITAPLPEEML DWMPEEIKAN LPK
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