Gene Pcryo_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0279 
Symbol 
ID4035611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp332957 
End bp334303 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content46% 
IMG OID637972728 
Producthomoserine dehydrogenase 
Protein accessionYP_579547 
Protein GI93005110 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00103779 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.156224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAAT CCATCAAACT AGCGATACTT GGTTTAGGCA CCGTCGGAAC GGGCGTGGTC 
AATCTAATCA ATGATAATTT AGATGAACTA AAACGTCGTA GCGGACGCGA CATTGTGATT
ACCGAAGTTG GTATTCGTCG TCAGCGTGAT GACATTAATC CCAATATTAT GCAAAACAGT
GATCTGATGG CAACCGCTGC CAGTGACAAT GTCGATATTG TCATCGAATT GATTGGCGGT
ACGACCCTTG CAAAAGACGT TATTATGCAC GCCATCAAAA ATGGCAAGCA TGTGGTGACC
GCCAATAAAG CGTTATTGGC TGAGCATGGT AATGAGATTT TTGCTTTTGC TGAACAGCAT
AATGTTCATG TCGCCTATGA AGCAGCCGTA GCAGGTGGTA TTCCAATTAT TAAGGTCATG
CGTGAAGGTT TAGCTGCCAA TAAAATTGAT TGGCTAGCGG GTATCATTAA TGGTACGGGC
AACTTTATCA TGACAGAGAT GCGCGATAAA GGTCGTCCGT TTGCCGATGT ACTGAACGAG
GCGCAAGCAC TTGGTTATGC TGAGGCCGAC CCTACTTTTG ACGTAGAAGG TATCGATGCG
GCGCACAAGC TGGCGCTACT TGCCTCTATC GCCTTTGGTA TTCCATTGCA GTTTGACAAA
GTCTATTGTG AAGGTATTAC CGGTATTACT TTGCAGGATG TCAATTACGC TGAAGAGCTT
GGCTATCGTA TCAAGCACTT GGGCTTTGCA GTTCGCCGTG CAGGAAATGG CAGTGGGGAC
GACAGCGCTG GTATTGAGCT GCGTGTACAC CCAACACTGA TTCCACAGAA CGCCCTGCTT
GCTAATGTTA ATGGCGTAAA GAATGCCGTA CTGGTGAACT CTCACCCTCT CGGTCAGACG
TTATATTGCG GTGACGGCGC GGGTGCAGGC GCAACGGCTT CTGCAGTGAT GGCAGATGTG
ATGGATTTAG TGCGTGTGTT AGGATGTAAA GATGCTGACC AACAAAACAG CAATGGTCAT
CATGTACCGC ACTTAGCCTT TATCCCTGAA AAATTGTCAG ATACGCCGAT ATTGCGTGCT
GAACAAATGA TTACTGGATA TTATTTACGT GTACATGCGT ACGATAGCCC TGGTGTGTTG
GCAGATATTA CCCGTATCTT GAGTGATGCC GGTATCAATA TCGATGCTAT TTTACAAAAA
CCGGCGCATA AGCTCGGGCA AGTGCCAGTG ATTATTTTAA CGCTGCCAGT GGGTGAGAGT
CAGATGAATC TTGCCATCGA AAAAATCGAG AAGTTAGACA CCATTATTGA TAAAGTAGTA
CGCATACGCT TAGATGAGCT GGCGTAA
 
Protein sequence
MSKSIKLAIL GLGTVGTGVV NLINDNLDEL KRRSGRDIVI TEVGIRRQRD DINPNIMQNS 
DLMATAASDN VDIVIELIGG TTLAKDVIMH AIKNGKHVVT ANKALLAEHG NEIFAFAEQH
NVHVAYEAAV AGGIPIIKVM REGLAANKID WLAGIINGTG NFIMTEMRDK GRPFADVLNE
AQALGYAEAD PTFDVEGIDA AHKLALLASI AFGIPLQFDK VYCEGITGIT LQDVNYAEEL
GYRIKHLGFA VRRAGNGSGD DSAGIELRVH PTLIPQNALL ANVNGVKNAV LVNSHPLGQT
LYCGDGAGAG ATASAVMADV MDLVRVLGCK DADQQNSNGH HVPHLAFIPE KLSDTPILRA
EQMITGYYLR VHAYDSPGVL ADITRILSDA GINIDAILQK PAHKLGQVPV IILTLPVGES
QMNLAIEKIE KLDTIIDKVV RIRLDELA