Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0279 |
Symbol | |
ID | 4035611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 332957 |
End bp | 334303 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637972728 |
Product | homoserine dehydrogenase |
Protein accession | YP_579547 |
Protein GI | 93005110 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00103779 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.156224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAAAT CCATCAAACT AGCGATACTT GGTTTAGGCA CCGTCGGAAC GGGCGTGGTC AATCTAATCA ATGATAATTT AGATGAACTA AAACGTCGTA GCGGACGCGA CATTGTGATT ACCGAAGTTG GTATTCGTCG TCAGCGTGAT GACATTAATC CCAATATTAT GCAAAACAGT GATCTGATGG CAACCGCTGC CAGTGACAAT GTCGATATTG TCATCGAATT GATTGGCGGT ACGACCCTTG CAAAAGACGT TATTATGCAC GCCATCAAAA ATGGCAAGCA TGTGGTGACC GCCAATAAAG CGTTATTGGC TGAGCATGGT AATGAGATTT TTGCTTTTGC TGAACAGCAT AATGTTCATG TCGCCTATGA AGCAGCCGTA GCAGGTGGTA TTCCAATTAT TAAGGTCATG CGTGAAGGTT TAGCTGCCAA TAAAATTGAT TGGCTAGCGG GTATCATTAA TGGTACGGGC AACTTTATCA TGACAGAGAT GCGCGATAAA GGTCGTCCGT TTGCCGATGT ACTGAACGAG GCGCAAGCAC TTGGTTATGC TGAGGCCGAC CCTACTTTTG ACGTAGAAGG TATCGATGCG GCGCACAAGC TGGCGCTACT TGCCTCTATC GCCTTTGGTA TTCCATTGCA GTTTGACAAA GTCTATTGTG AAGGTATTAC CGGTATTACT TTGCAGGATG TCAATTACGC TGAAGAGCTT GGCTATCGTA TCAAGCACTT GGGCTTTGCA GTTCGCCGTG CAGGAAATGG CAGTGGGGAC GACAGCGCTG GTATTGAGCT GCGTGTACAC CCAACACTGA TTCCACAGAA CGCCCTGCTT GCTAATGTTA ATGGCGTAAA GAATGCCGTA CTGGTGAACT CTCACCCTCT CGGTCAGACG TTATATTGCG GTGACGGCGC GGGTGCAGGC GCAACGGCTT CTGCAGTGAT GGCAGATGTG ATGGATTTAG TGCGTGTGTT AGGATGTAAA GATGCTGACC AACAAAACAG CAATGGTCAT CATGTACCGC ACTTAGCCTT TATCCCTGAA AAATTGTCAG ATACGCCGAT ATTGCGTGCT GAACAAATGA TTACTGGATA TTATTTACGT GTACATGCGT ACGATAGCCC TGGTGTGTTG GCAGATATTA CCCGTATCTT GAGTGATGCC GGTATCAATA TCGATGCTAT TTTACAAAAA CCGGCGCATA AGCTCGGGCA AGTGCCAGTG ATTATTTTAA CGCTGCCAGT GGGTGAGAGT CAGATGAATC TTGCCATCGA AAAAATCGAG AAGTTAGACA CCATTATTGA TAAAGTAGTA CGCATACGCT TAGATGAGCT GGCGTAA
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Protein sequence | MSKSIKLAIL GLGTVGTGVV NLINDNLDEL KRRSGRDIVI TEVGIRRQRD DINPNIMQNS DLMATAASDN VDIVIELIGG TTLAKDVIMH AIKNGKHVVT ANKALLAEHG NEIFAFAEQH NVHVAYEAAV AGGIPIIKVM REGLAANKID WLAGIINGTG NFIMTEMRDK GRPFADVLNE AQALGYAEAD PTFDVEGIDA AHKLALLASI AFGIPLQFDK VYCEGITGIT LQDVNYAEEL GYRIKHLGFA VRRAGNGSGD DSAGIELRVH PTLIPQNALL ANVNGVKNAV LVNSHPLGQT LYCGDGAGAG ATASAVMADV MDLVRVLGCK DADQQNSNGH HVPHLAFIPE KLSDTPILRA EQMITGYYLR VHAYDSPGVL ADITRILSDA GINIDAILQK PAHKLGQVPV IILTLPVGES QMNLAIEKIE KLDTIIDKVV RIRLDELA
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