Gene Pcryo_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0256 
Symbol 
ID4034642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp302822 
End bp304024 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content47% 
IMG OID637972705 
Productgeneral secretion pathway protein F 
Protein accessionYP_579524 
Protein GI93005087 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID[TIGR02120] general secretion pathway protein F 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.726784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCTT ATCATTATAA AGCGCTTGAC GATCGTGGCG GCATCCAAAA AGGCTTGCTT 
GAAGGTGATT CTGCGCGGCA AGTACGCCAG CAGCTGCGTG ATAAACAATG GACGCCTGTC
GAAGTCAACG CCGTCAATGA TAGGCAAAGT CAACATAAAA GCCGCTATAA AAAACCCTCT
GCTTATGAGT TGGCACTGCT TACCCGCCAG TTATCTGTGT TACTTGCTGC TGGTATTCCG
TTAGAGGAAA CCTTGGCAGC TGTCGCCAAA CAATCGCCAA AAACCCATAT CAAATCTTTG
ATACTTGCCG TGCGCTCGCA TGTCCTAGAA GGTCTCAGTT TGGCGCGCGC TTTGCAGCAA
GCGGCGAGCT TTCCCCCACT ATATATCGCT ACCATTGCAG CTGGAGAAAA ATCTGGTCAT
TTGGATTTGA TCTTAAATCA GCTTGCCGAT TACACGGAAA ATCGCTTTGC CTTACAGAAA
AAAATACAAG GCGCTATGGT TTATCCCATC GTGCTGATGG TGATGGCAGT TGGCGTAATT
ATGGGGTTAA TGAGCTTTGT AGTACCAAAA ATTGTCAAAG TGTTTGAGCA GTCCGAACAA
GCTCTGCCTT TAATTACCCA AATTGTCCTT AGCTTATCAA ATATTATTAC CCAGTGGTGG
TGGCTGATGC TGCTGGTGTT GGCAGGAACG GCATTTTTAT TCTATCGCTT TGCTCAGACG
CAAGCGGGCA AGCTGGCCAT AGATAGTGCT GTGCTAAGAT TGCCTATACT GGCACGCTTA
TCGAAAGGGT TGAATGCGGC GCGCTTTGCC AGTACGCTTG CGATATTGGT GCGCTCTGGT
GTGCCATTGA TTGAGGCGCT CCATATTGGC GCTGCGGTCA CCACCAATTT GCATATTCAA
AAAACCATCA TTACTGCTGC GGATAGAGTA ACAGAGGGTT CAAGTCTGTC GAGTCAATTA
GACAAATCGC CCTATTTTCC GCCGATGATG GTACAAATGA TTAAAAGTGG TGAAAACTCG
GGCGAGCTTG AAAATATGCT TAGCCGTGCT GCCAATATGC AGGAGGCAGA AGCCACCAAT
TTCATTAGTA CTTTATTGTC ATTACTTGAG CCTTTAATGC TGGTGCTGAT GGGTGTGGTC
GTCATGATTA TCGTAATGGC GGTGATGCTG CCAATTGTGA ATATGAATGA CTTGGCTGGC
TAG
 
Protein sequence
MPAYHYKALD DRGGIQKGLL EGDSARQVRQ QLRDKQWTPV EVNAVNDRQS QHKSRYKKPS 
AYELALLTRQ LSVLLAAGIP LEETLAAVAK QSPKTHIKSL ILAVRSHVLE GLSLARALQQ
AASFPPLYIA TIAAGEKSGH LDLILNQLAD YTENRFALQK KIQGAMVYPI VLMVMAVGVI
MGLMSFVVPK IVKVFEQSEQ ALPLITQIVL SLSNIITQWW WLMLLVLAGT AFLFYRFAQT
QAGKLAIDSA VLRLPILARL SKGLNAARFA STLAILVRSG VPLIEALHIG AAVTTNLHIQ
KTIITAADRV TEGSSLSSQL DKSPYFPPMM VQMIKSGENS GELENMLSRA ANMQEAEATN
FISTLLSLLE PLMLVLMGVV VMIIVMAVML PIVNMNDLAG