Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0250 |
Symbol | |
ID | 4034104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 294834 |
End bp | 295355 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637972696 |
Product | endoribonuclease L-PSP |
Protein accession | YP_579518 |
Protein GI | 93005081 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAA TGATTTCCAA AGCTATTTCT AAAACAGCGC TTACTAATTT ATCCAAGGCT TTTCTTATCA GTATCTGTGC ATTAGGATTT ACCGTTAGTG CCACTGCTGC GCCCGAAAAA ACTTCAACTC ATACACATCA TGGAGCAACT ATCACTAAGT CTAGCCCTGT GTTTTTAGGT GACGGCGGCA ATTATCCTTT CTCAGAAGCA GTCCGTGTCG GCGATACTTT GTATATGTCT GGTCAGATTG GCTTTAAAGA TGGCAAGCTG GTCAAAGGCG GTGTTAAAGC CGAAGCCAAA CAGACAATGG ATAATATCAA TACTACGTTA TTGAAATATG GTTACCAAAA GTCAGATATC GTTAAGTGTA TGGTGATGCT CACCGATATG GACGATTTTA ATGACTTCAA TAAAATCTAT AAGGCTGAAC TGGCAAAGCC TTATCCCGTC CGTTCAGCTT TTGGCGTAGC TGAATTGGCG GCAGGTGCCA GCGTTGAAGT TGAATGTATC GCTGTCAAAT AA
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Protein sequence | MSKMISKAIS KTALTNLSKA FLISICALGF TVSATAAPEK TSTHTHHGAT ITKSSPVFLG DGGNYPFSEA VRVGDTLYMS GQIGFKDGKL VKGGVKAEAK QTMDNINTTL LKYGYQKSDI VKCMVMLTDM DDFNDFNKIY KAELAKPYPV RSAFGVAELA AGASVEVECI AVK
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