| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0245 |
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| Symbol | |
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| ID | 4034099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 287484 |
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| End bp | 289526 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637972691 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_579513 |
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| Protein GI | 93005076 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGT CACCTCATTC CCCACAGTCT CAGTCATTAT CTGCGTCAGC TGTTGATTCT
GCTGTACCGC TATCAAAACT GCAACAAACG TATGCAGTGA TTCCACGTGA GCGTCCGCAG
ACGCCATTGC TCGACAGTGT GGATAGTCCT GCTGATCTCA AGACTTTTAG CAGTGCTGAG
CTGATTACTT TAGCCGATGA GCTAAGGCTG TTTGTATTGT ATTCAGCGGG TCAAAGCGGT
GGTCATTTCG GTGCCAATTT AGGCGTGATT GAATTGACTA TTGCGCTACA TTATTTGCTA
GACACCCCAC AAGATCAGAT CGTTTGGGAT GTGGGTCACC AAGCGTATGC GCACAAAGTA
CTGACAGGTC GCCGTGATCA GTTAGGTACT ATCCGCTCTA AAACTGGCTT AACGGCTTTT
CCCGAACGTG CCGAATCTGT CTATGATACC TTTGGGGTTG GGCATTCATC AACGTCCATC
TCAGCCGGTT TAGGCATGAG CTTAGCGCTA CGCTATCAAG GGCGCGCGCA GACGGTTGCC
TGTATTATCG GCGATGGGGC GATGACAGGT GGCATGGCGT TTGAAGCGAT GAATGACGCG
GTGCAACAAG ACGCTGATTT GATGGTGATT TTGAATGACA ATGACATGTC TATATCCTGC
TCGATCGGTG GCTTTTCACG GCATTTAGCA ATGCTTTGGG AGTCAGGGTA TCAAGTTGAT
ATCTCTGATG CAGGCGAGCC AATATTATGT CAACGCCCTG ATATGCAAGC CTTTGACCGA
CGTAAGCGTC ATAAAGAGCA GCGCGATGTA CCGCAACTAG AAGACAATCT ATTTAAGGCG
ATAGGCTTTA CCTATTTTGG TCCTTTTGAT GGTCATAATA TTCCTGAGCT GCTACGTGTA
TTGTCGCTTG CCAAGCAAGT CAAAGGTCCA GTTCTGGTCC ATATTTATAC TACCAAAGGT
AAAGGCTTTG CGCCTGCTGA ATTAGACCCA GTCGGCTATC ATGCTATTAG TAGCTTACCT
GCTGAAGATA ACGCACCAAA AACTGAAAAA GCAGCGATTA AACCTTCCTT AAAGTACTCG
CAAGTATTTG GACAGTTTTT ATGTGACAAA GCGGCACAAG ATAAGAAGCT GCTCGCCATT
ACCCCAGCGA TGGAAGAAGG CTCAGGGATG ATTGAGTTTG CTCGTCAATT TCCAGAGCGT
TTCTTTGATG TAGCGATTGC TGAGCAACAC GCTGTGACGT TGGCGGGTGG CATGGCAACA
CAAGGTGTAA AGCCGATTGT GGCGATTTAT TCGACGTTTT TACAGCGTGG GTACGATCAG
CTGATACATG ATGTTGCTTT GCAAAATCTT GATGTGATGT TCGCCATTGA TCGCGCCGGC
CTAGTTGGTG AAGATGGCGC TACGCATGCA GGGGTGTTTG ATTTTGCCTT TTTACGCTGC
GTGCCCAATA TGCTGATTGC AGCGCCAAAA GATGAAAACG AATGCTATCA TTTGCTCAAT
ACTTGTTATG AATACCAAGG TTGTACCGCA GTGCGCTATC CGCGCGGTGT TGGCACTGGT
GCAACTATTA TACAACCAGC GCAAATTTAC AACATTGGTG AGGCGGTTAT AGAGTCGGTA
CTTGGTACAG ACGATGCACC CAAGAAACTG GCATTATTGG CATTTGGTAC GATGGTCGAA
ACGGCTCAGA AAGCCGCAGA AATGATTGCG AAATCCCCTT TATTAGCATC AAGCTGTCAG
CTGCATGTGG TCAATATGCG TTGGGTGAAG CCTTTAGATA CTAACTTGCT TGAAACCCTA
GTCGAGCAAG GTGTTACTCA TATAGCGACT TTAGAAGAGC ATATGATCAT GGGCGGCGCG
GGTAGTGCGG TCAATGAATA CCTATTAAAT GAATCGGCTG CTTTTAAAAT CCATCGTCCA
ACTATCTGCA ATATAGGTAT CCCTGATCGG TTTGTTGCGC ATGGCTCTCA AGCAGAACAG
CTAGCAGATT GTGGTCTAGA TGTGGAAGGT GTGTTCAATC AGCTCCAAAA CTTATTATCT
TAA
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| Protein sequence | MQQSPHSPQS QSLSASAVDS AVPLSKLQQT YAVIPRERPQ TPLLDSVDSP ADLKTFSSAE
LITLADELRL FVLYSAGQSG GHFGANLGVI ELTIALHYLL DTPQDQIVWD VGHQAYAHKV
LTGRRDQLGT IRSKTGLTAF PERAESVYDT FGVGHSSTSI SAGLGMSLAL RYQGRAQTVA
CIIGDGAMTG GMAFEAMNDA VQQDADLMVI LNDNDMSISC SIGGFSRHLA MLWESGYQVD
ISDAGEPILC QRPDMQAFDR RKRHKEQRDV PQLEDNLFKA IGFTYFGPFD GHNIPELLRV
LSLAKQVKGP VLVHIYTTKG KGFAPAELDP VGYHAISSLP AEDNAPKTEK AAIKPSLKYS
QVFGQFLCDK AAQDKKLLAI TPAMEEGSGM IEFARQFPER FFDVAIAEQH AVTLAGGMAT
QGVKPIVAIY STFLQRGYDQ LIHDVALQNL DVMFAIDRAG LVGEDGATHA GVFDFAFLRC
VPNMLIAAPK DENECYHLLN TCYEYQGCTA VRYPRGVGTG ATIIQPAQIY NIGEAVIESV
LGTDDAPKKL ALLAFGTMVE TAQKAAEMIA KSPLLASSCQ LHVVNMRWVK PLDTNLLETL
VEQGVTHIAT LEEHMIMGGA GSAVNEYLLN ESAAFKIHRP TICNIGIPDR FVAHGSQAEQ
LADCGLDVEG VFNQLQNLLS
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