Gene Pcryo_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0238 
Symbol 
ID4035430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp280254 
End bp281132 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content46% 
IMG OID637972684 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_579506 
Protein GI93005069 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACATA CTGGCATCAG CAATAAAAGC CCTTTTCGTA CGGCAACGCT ATGGCTGATT 
TGGGGTTGGC TTCTTATCTT TGCGCTATTA CCCAATATAT TGGTCATTGC CGTCAGTTTT
CTGACCCGTG ATAGCACAGC TTTTATTAGT TTGCCGGTCA CTATCGACAG CTACGTGCGC
ATGATTGACC CGCTTTATTT TGATGTCTTT GTGCATTCAT TATGGATGGC GGGCATCACT
ACGGTCATCT GCTTATTACT CGGCTACCCC TTTGCTTGGT TTGTATCTCG AGTCAGTAAA
CGCTGGCAGC CACTGTTGAT GCTCATGCTA ATATTGCCAT TTTGGACCAA CTCTTTGGTA
CGAACTTATG CGCTAAAACT CTTATTTGCT AGTAACGGTT TGATTAACAA ATCCTTATTA
GCAATCGGCA TCATTGATGC GCCCATTGAT ATTTTGTATA CCCAAGGCGC AGTGATTGCT
GGTTTAACGT ATTTATTGTT TCCGTTTATG GTGCTGCCGC TATATGCCGT GTTTAGCGAT
TTGCGCAATG ATATGCTGCT TGCCTCGCAG GATTTGGGCG CATCGAAACC GCAAACCTTT
TGGCATGTGG TACTACCCTT AACCACACCT GGTATTATCT CAGGGGTGCT GTTGGTACTA
TTGCCAGCAA TGGGTATGTT TTATGTTGCC GATATTTTGG GCGGTTCACG CAACTTACTC
GTTGGTAATA TTATCAAAAA CCAGTTTTTA GATGCCCGTG ATTGGCCATT TGGCGCGGCC
GCCAGTGTGC TATTGACGCT TGCTATGGCG GTATTATTGC TTGCCTATCG CGCTAGTAGT
CGCCGTATCG GCAAGACTGA CTTTAGCGAG GTGGCCTAA
 
Protein sequence
MAHTGISNKS PFRTATLWLI WGWLLIFALL PNILVIAVSF LTRDSTAFIS LPVTIDSYVR 
MIDPLYFDVF VHSLWMAGIT TVICLLLGYP FAWFVSRVSK RWQPLLMLML ILPFWTNSLV
RTYALKLLFA SNGLINKSLL AIGIIDAPID ILYTQGAVIA GLTYLLFPFM VLPLYAVFSD
LRNDMLLASQ DLGASKPQTF WHVVLPLTTP GIISGVLLVL LPAMGMFYVA DILGGSRNLL
VGNIIKNQFL DARDWPFGAA ASVLLTLAMA VLLLAYRASS RRIGKTDFSE VA