Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0238 |
Symbol | |
ID | 4035430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 280254 |
End bp | 281132 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637972684 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_579506 |
Protein GI | 93005069 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACATA CTGGCATCAG CAATAAAAGC CCTTTTCGTA CGGCAACGCT ATGGCTGATT TGGGGTTGGC TTCTTATCTT TGCGCTATTA CCCAATATAT TGGTCATTGC CGTCAGTTTT CTGACCCGTG ATAGCACAGC TTTTATTAGT TTGCCGGTCA CTATCGACAG CTACGTGCGC ATGATTGACC CGCTTTATTT TGATGTCTTT GTGCATTCAT TATGGATGGC GGGCATCACT ACGGTCATCT GCTTATTACT CGGCTACCCC TTTGCTTGGT TTGTATCTCG AGTCAGTAAA CGCTGGCAGC CACTGTTGAT GCTCATGCTA ATATTGCCAT TTTGGACCAA CTCTTTGGTA CGAACTTATG CGCTAAAACT CTTATTTGCT AGTAACGGTT TGATTAACAA ATCCTTATTA GCAATCGGCA TCATTGATGC GCCCATTGAT ATTTTGTATA CCCAAGGCGC AGTGATTGCT GGTTTAACGT ATTTATTGTT TCCGTTTATG GTGCTGCCGC TATATGCCGT GTTTAGCGAT TTGCGCAATG ATATGCTGCT TGCCTCGCAG GATTTGGGCG CATCGAAACC GCAAACCTTT TGGCATGTGG TACTACCCTT AACCACACCT GGTATTATCT CAGGGGTGCT GTTGGTACTA TTGCCAGCAA TGGGTATGTT TTATGTTGCC GATATTTTGG GCGGTTCACG CAACTTACTC GTTGGTAATA TTATCAAAAA CCAGTTTTTA GATGCCCGTG ATTGGCCATT TGGCGCGGCC GCCAGTGTGC TATTGACGCT TGCTATGGCG GTATTATTGC TTGCCTATCG CGCTAGTAGT CGCCGTATCG GCAAGACTGA CTTTAGCGAG GTGGCCTAA
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Protein sequence | MAHTGISNKS PFRTATLWLI WGWLLIFALL PNILVIAVSF LTRDSTAFIS LPVTIDSYVR MIDPLYFDVF VHSLWMAGIT TVICLLLGYP FAWFVSRVSK RWQPLLMLML ILPFWTNSLV RTYALKLLFA SNGLINKSLL AIGIIDAPID ILYTQGAVIA GLTYLLFPFM VLPLYAVFSD LRNDMLLASQ DLGASKPQTF WHVVLPLTTP GIISGVLLVL LPAMGMFYVA DILGGSRNLL VGNIIKNQFL DARDWPFGAA ASVLLTLAMA VLLLAYRASS RRIGKTDFSE VA
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