| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0227 |
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| Symbol | |
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| ID | 4035419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 270806 |
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| End bp | 271669 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637972673 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_579495 |
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| Protein GI | 93005058 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0140317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACGC ATTTGTCCGC ACCTGGGGTG AATTTGGGTG CTTATATTAA TACCGTGCAC
CAAATCCCTA TCTTGACTCC GACGCAAGAG CAAGAGCTTG CCCATCGCTA TTATGATGAA
GGCGATGTAG AAGCGGCGCG TTTACTGGTC ATGTCGCATT TGCGTTTTGT CATTCATATT
GCCCGCAGCT ATTCAGGCTA TGGGTTACCG CAAGCAGATT TGATCCAAGA AGGTAATTTG
GGACTTATGA AGGCGGTAAA GCGTTTTGAT CCTAACAAAG GCGTACGTCT AGTATCATTT
GCAGTGCATT GGATCAAAGC AGAGATTCAT GAATTTGTCA TCCGTAACTG GCGTATTGTA
AAAGTTGCTA CAACCAAGGC GCATCGTAAA CTGTTCTTTA ACTTACGCAG TTTAAAAAAG
ACCAACAATC AGTTGACCCT CGAAGAAGCC GATGCGATTG CCAATGACTT AAACGTTACT
CGTAAGCAAG TGCTTGAGAT GGAGTCGCGC CTGACCTCTT ATGATGCGTC ATTTGAGGCG
CAATCAAGTG ACGATGACGA TGGACGTTAT GCGCCACAGC TATTTTTGGA AGATGGCATT
GACCCTGCCG AAATCGTCGA AGAATCTGAC TGGGAAGAAA ATAATTCATC AGCCTTGATT
GCTGCAATGG AAACCTTGGA TGATCGCTCA CGTGATATTG TCGAGCAGCG CTGGTTATCT
GAGCAAAAAT CAACCTTGCA TGAGTTGGCA GCGGTCTACT CTATCTCTGC TGAGCGCGTA
CGCCAAATTG AGAAAAATGC CATGGATAAA ATCCGTGAAG CGATGACCAT CGACAGTGTG
ATTTTACCTG ATGATATTCA ATAA
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| Protein sequence | MPTHLSAPGV NLGAYINTVH QIPILTPTQE QELAHRYYDE GDVEAARLLV MSHLRFVIHI
ARSYSGYGLP QADLIQEGNL GLMKAVKRFD PNKGVRLVSF AVHWIKAEIH EFVIRNWRIV
KVATTKAHRK LFFNLRSLKK TNNQLTLEEA DAIANDLNVT RKQVLEMESR LTSYDASFEA
QSSDDDDGRY APQLFLEDGI DPAEIVEESD WEENNSSALI AAMETLDDRS RDIVEQRWLS
EQKSTLHELA AVYSISAERV RQIEKNAMDK IREAMTIDSV ILPDDIQ
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