Gene Pcryo_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0196 
Symbol 
ID4035676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp231281 
End bp232480 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content44% 
IMG OID637972642 
Productbeta-lactamase 
Protein accessionYP_579464 
Protein GI93005027 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGTGC TAAAAACACT GTTTAAATGG ATCGTTTTGC CTATTTTAGC GCTACTCATT 
ATTATCAGCT TGGGCTTAGT AGTGACCGGT AATGCTTATA TCTTTCGCGG TTTACAGCTC
ACTTATTTGA AAGGTGAAGC CACTGCCAAT ATTGATGATT ATATCGATTT TGACAATCGG
ACTATCCGTG CAAAAGACGC TATCGAATGG GAAAAAGATT CCAATTTTGA GCAAGTCAAA
CTCACCACAA CGTTGCAGAA TGCTTTAGAT ACAGACCAAA CAGTGGCCTT TGCTATTATC
AAAGACGGCA AGCTACTGTA CGAAAACTAC TGGCAAGGTT ATGGCAGCGA TTCGCACACC
AACAGCTTTT CGATGGCAAA AACCGTCACG ACTATGCTCT ATCTCAAAGC GGTGGAGGAC
GGCTATATCG GTAGCGTTGA TGAGCCGATT ACCAAGTGGT TACCTGAATA TGCGGACAAG
CAATATGCGC AAAACTGTAC CCTCGCGGAT TTATCAGCGA TGACCTCAGG CTATGATTGG
ACGGAGGATT ACTACTTCCC AATTAATCCC ACCGCAGAAT CCTACTATGG TCATGACTTA
GTTAAGCAAA TGGTCAATCG AGATTTCGTA GAGGCGTGTG GCGGTCAGTT CGAATACTCA
TCAGGTGATA CGCAAATGCT CGGTATTGCT CTATCACGTG CGTTAGAACC TCATGGCTAT
ACACTTTCTA GCTATTTGGA AGAGAGGTTT TGGCAACCTT TAGGGATGCA AGGCGACGCC
TATTGGTCGC TTGATGGCTC AGAGAGCATC GAAAAAGTAT ATTGCTGTCT AAACGCTAGT
GCGCTGGATT TTGCTAAATT TGGGCAGTTA TTATTGAACG GTGGCGAGTG GCAAGGTGAG
CAACTGCTTA GCAAAGCGCA TGTTGATTTT ATGATTACGC CAAACGCGGG TGCATTTGCA
GAAGGGCAGG CGCAAGTTTA TGGACATTCA GTGTGGACGG ATATGGAGAG TCCGATTCCG
TTTTATGCAA TGCTTGGTCA TTTAGGTCAG AGAGTATTAG TGTTGCCTGA AGAGAATGCA
ATCATCGTCA GATTGGGCAA GCAGAAAGGT TTGCCCACAC CAGTAGAGGG ATTTCATTTA
GAGCCAGATT TGGGTCAATA TGTGACGGAG GTGAAAATGA TTTTGGATGG CTTAGAATAA
 
Protein sequence
MVVLKTLFKW IVLPILALLI IISLGLVVTG NAYIFRGLQL TYLKGEATAN IDDYIDFDNR 
TIRAKDAIEW EKDSNFEQVK LTTTLQNALD TDQTVAFAII KDGKLLYENY WQGYGSDSHT
NSFSMAKTVT TMLYLKAVED GYIGSVDEPI TKWLPEYADK QYAQNCTLAD LSAMTSGYDW
TEDYYFPINP TAESYYGHDL VKQMVNRDFV EACGGQFEYS SGDTQMLGIA LSRALEPHGY
TLSSYLEERF WQPLGMQGDA YWSLDGSESI EKVYCCLNAS ALDFAKFGQL LLNGGEWQGE
QLLSKAHVDF MITPNAGAFA EGQAQVYGHS VWTDMESPIP FYAMLGHLGQ RVLVLPEENA
IIVRLGKQKG LPTPVEGFHL EPDLGQYVTE VKMILDGLE