Gene Pcryo_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0171 
Symbol 
ID4035644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp200923 
End bp202224 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content46% 
IMG OID637972613 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_579439 
Protein GI93005002 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTA AAAATGAACA ACTATTCGCG CAAGCACGTA AGCATATCCC TGGCGGTGTA 
AATTCACCTG TCCGAGCTTT TGCTGGTGTC GGTGGTACGC CAATCTTTAT GCACCGTGCC
AATGGTAGCA AAATCTATGA TACCGAAGAC AATGCTTATA TTGATTATGT TGGCTCTTGG
GGTCCAATGA TTTTGGGTCA TGCCCATCCA AAAGTTATTG ATGCGGTCAA AAAAGCGGCT
GATGATGGTT TGAGCTTTGG TACGCCAACG CCATTTGAGA CCACCGTTGC CGATAAAATT
TGCGAAATCG TTCCGAGTGT TGAGATGATT CGTATGACCA GCTCAGGCAC GGAAGCGACG
ATGAGTGCGA TTCGTTTGGC ACGTGGTTAT ACTCAGCGTG ACAAAATCGT CAAGTTTGAA
GGCTGCTACC ATGGTCATTC AGACAGCCTA TTAGTAAAAG CAGGCTCAGG CATGCTGGAT
ATTGGTGAGC CTACCTCAAA AGGTGTACCA GCAGATTTTG CCAAGCATAC TATTACGATT
CCTTATAACG ATCCACAAGC GATTAAAGAC TGTTTCGAAA AGTGGGGCGA AGAGATTGCC
TGCGTTATCT TAGAGCCTAT CGCGGGCAAC ATGAACATGG TGATTCCAAG CCAAGAATTC
CATGATACGT TGCGTGCAGA GTGTACTGCC AATGGCGCGG TATTAATCTT TGATGAAGTC
ATGACGGGCT TTCGCGTTGG ACTTGGCGGT GCGCAAGCGC ACTTCGGTAT CGACCCTGAT
TTAACTTGCT TTGGCAAAAT CATCGGTGCA GGTCTGCCAG TTGGTGCGTT CGGCGGTAAG
AAAGACATCA TGTCTTGCAT TGCACCACTT GGTGGTGTCT ATCAAGCGGG TACGTTATCC
GGTAATCCGC TGGCGATGCG CGCTGGTATC GCCATGTTTG AGGATTTAAC TGCTGAAGGC
TTCTATGATG AGCTATCAGC GAAAGTAGAC CATTTGGTTG ATGGCTTCCA AGCGGCTGCT
GACAAGCATG GCATCAATAT GCGCACCAAT AAATTGGGCG GTATGTTTGG AATGTTCTTT
GTCAAAGACA GTGCGACGAC TGTACCTCAA AACTTTGATG ACGTGACTGA GTGTGATATG
GAGTTATTTA ATACTTTCTT CCACGGTATG CTTGATCGTG GTATTTATCT GGCACCGTCT
GCTTATGAAG CAGGCTTTAT GTCTATCAAG CATAGTAACG AAGATATTGA AGCGACTATT
AAAGCCGCTG ATGAAATATT TGCAGAAATG GCAAAAGCGT AA
 
Protein sequence
MSTKNEQLFA QARKHIPGGV NSPVRAFAGV GGTPIFMHRA NGSKIYDTED NAYIDYVGSW 
GPMILGHAHP KVIDAVKKAA DDGLSFGTPT PFETTVADKI CEIVPSVEMI RMTSSGTEAT
MSAIRLARGY TQRDKIVKFE GCYHGHSDSL LVKAGSGMLD IGEPTSKGVP ADFAKHTITI
PYNDPQAIKD CFEKWGEEIA CVILEPIAGN MNMVIPSQEF HDTLRAECTA NGAVLIFDEV
MTGFRVGLGG AQAHFGIDPD LTCFGKIIGA GLPVGAFGGK KDIMSCIAPL GGVYQAGTLS
GNPLAMRAGI AMFEDLTAEG FYDELSAKVD HLVDGFQAAA DKHGINMRTN KLGGMFGMFF
VKDSATTVPQ NFDDVTECDM ELFNTFFHGM LDRGIYLAPS AYEAGFMSIK HSNEDIEATI
KAADEIFAEM AKA