| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0158 |
|---|
| Symbol | |
|---|
| ID | 4035631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 189068 |
|---|
| End bp | 189973 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637972600 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_579426 |
|---|
| Protein GI | 93004989 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0298297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG CATACGACGA TATTAAAACC CGACTACAAG GCTCAATGGT AGCTTTGATA
ACGCCCATGC TTCGTGACGG CACGGTCGAT TATAAACGTC TGGCAGACCT CATAGATTGG
CAGATTGAAC AAGGCACACA TTGCCTTGTC GCTGTTGGTA CGACTGGCGA ATCTGCAACC
TTGTCAATGC AAGAGCATAG CGATGTCATT CGCTATTTTG TACAGCATGT TAAAGGTCGT
GTGCCGGTGA TTGCAGGTAC TGGTGCGAAC AATACGGTGG AAGCCATTAA GCTGACCCAA
GATGCCGCAG ATGCCGGTGC AGATTGTGCA TTATTGGTCG CCCCTTATTA TAATAAGCCG
CCACAAGAAG GCTTATATCA ACATTACAAA GCCATTGCTG AAGCTGTTAA TATCCCGCAA
ATGCTGTATA ACGTCCCTGG ACGCACCGTC GTTGATATCG CGCAAGAAAC AGTCGAGCGT
TTAGCGGATA TCGATAATAT CGTTGCTATC AAAGACGCGA CAGGTTCTGT TGCTCGTGGT
GAGCAATTAA TAAAAGCAGT GGGCGATCGT CTTGTTGTCT TGTCTGGTGA TGATGGTAGT
GCCCTTGAGC TGATGAAATT TGGTGGTAAA GGGAATATCT CTGTGACTGC CAACGTCGCA
CCAAAGGCCA TGAGTGAAAC CTTTACAGCA GCCTTGCGCG GTGATTTCGA TACCGCAAGT
CAAGTACATG ATATCGTTAA ACATTTACAT CGTGACTTGT TTATCGAATC AAGCCCTATT
CCAGCCAAGT ACGCTTTGCA CAAAATGGGT ATGATAGATC AAGGTATTCG CCTGCCGCTG
GTATGGCTAG CCGAGCAACA TCACGCGACG ATTGATAGTG CTTTGGTTCG TGCAAACTTA
TTATAA
|
|---|
| Protein sequence | MSTAYDDIKT RLQGSMVALI TPMLRDGTVD YKRLADLIDW QIEQGTHCLV AVGTTGESAT
LSMQEHSDVI RYFVQHVKGR VPVIAGTGAN NTVEAIKLTQ DAADAGADCA LLVAPYYNKP
PQEGLYQHYK AIAEAVNIPQ MLYNVPGRTV VDIAQETVER LADIDNIVAI KDATGSVARG
EQLIKAVGDR LVVLSGDDGS ALELMKFGGK GNISVTANVA PKAMSETFTA ALRGDFDTAS
QVHDIVKHLH RDLFIESSPI PAKYALHKMG MIDQGIRLPL VWLAEQHHAT IDSALVRANL
L
|
|---|
| |