Gene Pcryo_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0152 
Symbol 
ID4035511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp179785 
End bp180795 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content45% 
IMG OID637972594 
Productputative 4-amino-4-deoxychorismate lyase 
Protein accessionYP_579420 
Protein GI93004983 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCAT CAAATAGCTG GGTTTGTTTA ACGGCATTAG ACAAGCAGAC CACAGCCAGT 
ACCGCCTCAT TAGACAATCG CGGCTTGGCA TACGCCGATG GTTTTTTTAC CACCATGGGC
GTTATCAATG GGCAGATACT GTGGGCGGAG TATCATCATC AGCGTCTCAT CTCTCATGCC
AAAGCCTTGC AGCTTGATTT AGACCACTGC TCTTTATTAT CTATCTTGCA AATGCATGCG
CAGCAGCTAC AACAAGGTAT GCTAAAGCTT GTCATCACAC GCGCCGCGCA AGATATCCGT
GGTTATGGCT ATACGCCAAG TGAGTGCGGT AGCACATGTG AGATTTGGCT AAAATCCTTG
GCGATGAAGG TTAGCACTAC TGAGCCATTG CCGTTAGCTG ATGGTATTTT TGTTCCGATG
CAGCCTATGA GCACTGCTGT TTGTTTATCT TCGCAAATCG CTTGTCTGCC GTCGTCTCTT
GCTGGACTCA AAAGTCTAAA TCGTCTTGAT AATGTGTTGG CGAGTGCAGA GTTGCAGGAT
ATCAAAGCTC GTTCATTAAA CTCTAATGGC TCGCAAGATA TTGGTGAGGG CTTGTTACGT
GATATGACTG GGTGCTGGGT TGAGGGCACG ATGAGCAATA TGTTTTATCA ATTATCTGAT
TGCCGACTGG TAGAGTCGCC ATCTTCAGAG ATGATAAATA CGGCTAATGA TGATAAAGAT
AGTGCTGATA AAAACAAGGC TGCTAAAGGC AACGCAAATT ATTTAACCCA AGGTCAATGG
TATACGTCAT CAATGGCACA ATCGGGCGTC GCTGGGGTGA TGCGGCAAGT AATTATTGAT
GAGTTATCTA CGACGAAATA TCCAGTTGTT GTGCGGTCAT TACAAGATAA GGATTTGCCA
CAGCTTCAGC AGCTGTTCTT TTGCAATGCG TTACGCGGTA TTATGCCAAT GACCAGTCTG
ACGTTACTGT CGGGTGAAAT AGTGAGTTTT AAGCGATTTA ATCATATTTA A
 
Protein sequence
MQPSNSWVCL TALDKQTTAS TASLDNRGLA YADGFFTTMG VINGQILWAE YHHQRLISHA 
KALQLDLDHC SLLSILQMHA QQLQQGMLKL VITRAAQDIR GYGYTPSECG STCEIWLKSL
AMKVSTTEPL PLADGIFVPM QPMSTAVCLS SQIACLPSSL AGLKSLNRLD NVLASAELQD
IKARSLNSNG SQDIGEGLLR DMTGCWVEGT MSNMFYQLSD CRLVESPSSE MINTANDDKD
SADKNKAAKG NANYLTQGQW YTSSMAQSGV AGVMRQVIID ELSTTKYPVV VRSLQDKDLP
QLQQLFFCNA LRGIMPMTSL TLLSGEIVSF KRFNHI