| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0132 |
|---|
| Symbol | |
|---|
| ID | 4034256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 154923 |
|---|
| End bp | 155798 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637972574 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_579400 |
|---|
| Protein GI | 93004963 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACA ATATCAACCC ATTAGCGAAT CAGTCGGCAA ACCATCCAGC CGACAATATA
GCCAATAATA TTGCAAGCCA GCAGACTGAA TTGCAATCGT CTGCAACCGA ATTAACCCAC
GGGAATATTC GTGACTTTGT ACCCTCTGAA AACTGCTTAG ATGGCAAGAC CATTTTAGTC
ACAGGCGCAG GTGATGGCAT TGGTCGGGTC GCTGCATTGA CCTATGCACG CTATGGCGCA
ACGGTGCTGC TATTAGGACG TACCAGTAGC AAGCTTGAAT ATGTTTATGA TGAAATCGAG
AGCTTTGGTG GTAAGCAACC TGCTATGTTA CCGATGAATC TAGAAGGGGC GACTTATGCA
GAAATGCAAA AGCTAGAAAA TTTGATTCAT AGAGAAGTTG GTCAGCTAGA TGGGATATTG
CATAATGCTG GGATGCTTGG TCCATTGACG CCACTTGAGA TGTACGATGT AGATATGTTT
GCTCAAGTCA TGAAGATTAA CTTCACAGCG ACCTTTATGC TTACCCAAGC GCTACTGCCG
TTACTCAAAG ATGCACCGCA TGGTTCTATC GTATTTACAT CTAGCAGCGT TGGTACGCAT
CCTCGCGCAT TTTGGGGTGC TTACGCGCTG TCTAAGCAAG CGGTAGAAGG AATGAGCGAT
ATCTTTACCC AAGAGACGCA AAACACCACC AATCTGCGTT TTAACTGTAT CAATCCGGGT
GGTACTCGCA CCAATATGCG TGCTCACGCT TATCCAGGTG AAAATCCGAT GAGTCTGAAA
ACTCCTGAAG ATATTATGGC AGGTTATGTG TGCTTGATGA GTGATGAGAG TATCGGGGTA
CGTGGACAAG TGGTTGAGTT ACAACCCAAG GATTGA
|
|---|
| Protein sequence | MSDNINPLAN QSANHPADNI ANNIASQQTE LQSSATELTH GNIRDFVPSE NCLDGKTILV
TGAGDGIGRV AALTYARYGA TVLLLGRTSS KLEYVYDEIE SFGGKQPAML PMNLEGATYA
EMQKLENLIH REVGQLDGIL HNAGMLGPLT PLEMYDVDMF AQVMKINFTA TFMLTQALLP
LLKDAPHGSI VFTSSSVGTH PRAFWGAYAL SKQAVEGMSD IFTQETQNTT NLRFNCINPG
GTRTNMRAHA YPGENPMSLK TPEDIMAGYV CLMSDESIGV RGQVVELQPK D
|
|---|
| |