| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0122 |
|---|
| Symbol | |
|---|
| ID | 4034246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 145239 |
|---|
| End bp | 145670 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637972564 |
|---|
| Product | competence protein ComEA helix-hairpin-helix region |
|---|
| Protein accession | YP_579390 |
|---|
| Protein GI | 93004953 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
|---|
| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.214821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGA CTAATAAAAG CTTGCTTATT AAATGGTTAG CCATCAAATG GTCGTTTATT
AAATGGCAGC ATGCTAATTT GTTTAAAAAT GTAGCCATTT TTTTAGTAGG CATGGTTTCT
ATCATGGCTA TGCTGTCTCA TCCTGTCTTT GCCGCCCCTT GTTTTGATAA CGCCCAAAGT
GCTTATAACT ACATATTGAC GCAAGAGACA GCACAAACTC AAGCACGTAT GCAGTCAATC
ATTAATATTA ATCGAGCAAC AGAAGGTGAG CTTACGTTGC TACATGGTAT CGGTAGCAAT
AAGGCGCAAG CCATTATCCT ATATCGTGAG ATGTTTGGCA GTTTTAGAAC GGTTGATGAA
TTGACAAAGG TAAAGGGTAT TGGCGCAAAA ACCGTTGATA AAAATCGAGG ACGTTTGACC
GTGCAAGATT AA
|
|---|
| Protein sequence | MNATNKSLLI KWLAIKWSFI KWQHANLFKN VAIFLVGMVS IMAMLSHPVF AAPCFDNAQS
AYNYILTQET AQTQARMQSI ININRATEGE LTLLHGIGSN KAQAIILYRE MFGSFRTVDE
LTKVKGIGAK TVDKNRGRLT VQD
|
|---|
| |