Gene Pcryo_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0102 
Symbol 
ID4034434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp117512 
End bp118624 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content47% 
IMG OID637972544 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_579370 
Protein GI93004933 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAA ATACGATTCC TGAGATTATC GAAGACATTC GTGCAGGTAA AATGGTCATC 
TTGATGGATG ATGAAGACCG CGAAAACGAA GGCGATATTA TCATGGCAGC GACCCACGTG
CGCCCTGAAG ATATCAACTT TATGATTACT CATGCACGTG GCTTGGTCTG TTTGACCTTG
TCACAAGCAC GTTGCCAGCA GTTGGCACTG CCACTCATGT CTGACCGTAA TGAAGCAAAA
TTTAGTACCA ATTTTACCGT TTCTATTGAA GCGGCTGAAG GCGTGACTAC GGGTATTTCA
GCCGCTGACC GCGCGCGTAC CATTCAAGCA GCGGTCTCCT CTTCTGCAAA ACCAGAAGAC
ATCGTTCAGC CTGGGCATAT TTTCCCAATC ATGGCACAGA ATGGTGGCGT CTTACATCGT
GCCGGACATA CCGAAGCAGG TTGTGATTTG GCACGTCTTG CCGGACTTGA GCCAGCAGCG
GTGATTGTAG AGATTATCAA TGCGGATGGC ACCATGGCAC GCCGTGATGA TCTTGAAGTA
TTTGCAAAGG AACATGATTT AAAAATTGGT ACGATTGCTG ATTTGATTAA CTACCGTATT
GCTAATGAGC AAACCGTCGA AGAGATTGCC TCGCATCCGT TTGAGACCGA GTATGGCACT
TTTACCTTAC ATCGTTTCCG TGAGTTCGGT GCGACTGAAA CCCATTTAGC TTTGGTTAAA
GGCGATGTGA GCCAAGGTAT TAGCACCGTT CGCGTCCATG GTTTCCATCC ATTACGTGAC
TTGTTTGCTG CCAAAAATGA TACCACTGGT CGTAGCGGCT GGAGCGTACG CTCAGCATTA
GAAGAGATCA GTGCATCAGA GCGTGGTGTC TTGGTTTGGA TTGGCAATCA TGAGCCGACT
GACTTGGGCG ATGCTTTGGA TAAGGCGGCA TTGAATGAAG CTCTATCTAC CATCACACAG
CAACCATATC GCAGTATTGG TGTTGGCGCA CAGATTTTGC GTCATTTAGG GGTACGTGAT
ATGCGCCTCT TGTCCTCACC GATGAAGTTT TATGCCTTAT CAGGTTTTGA TTTGAACGTG
GTTGATTTTG TCCATGCACC AAAGCAAGAT TAA
 
Protein sequence
MSLNTIPEII EDIRAGKMVI LMDDEDRENE GDIIMAATHV RPEDINFMIT HARGLVCLTL 
SQARCQQLAL PLMSDRNEAK FSTNFTVSIE AAEGVTTGIS AADRARTIQA AVSSSAKPED
IVQPGHIFPI MAQNGGVLHR AGHTEAGCDL ARLAGLEPAA VIVEIINADG TMARRDDLEV
FAKEHDLKIG TIADLINYRI ANEQTVEEIA SHPFETEYGT FTLHRFREFG ATETHLALVK
GDVSQGISTV RVHGFHPLRD LFAAKNDTTG RSGWSVRSAL EEISASERGV LVWIGNHEPT
DLGDALDKAA LNEALSTITQ QPYRSIGVGA QILRHLGVRD MRLLSSPMKF YALSGFDLNV
VDFVHAPKQD