| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0073 |
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| Symbol | nusA |
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| ID | 4034199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 82931 |
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| End bp | 84415 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637972515 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_579341 |
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| Protein GI | 93004904 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.837556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.355658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCGTG AAATCTTAAC GGTAGTAGAA ACTGTCAGTA ACGAGAAGGG CTTAAATCCT
GAAGACATCT TTGAAGCAAT CGAAGATGCT TTGGTCGTCT CGACTAAGAA AAAAGTATAT
ACCGATCAGC CGGAAGTAGA AGTGCGGGTT TCAATTGACC GTACAACAGG CGATTATGAT
ACTTATCGTT ATTGGACAGT GGTTGCGGAT GAAGACCATG AAATGCCTGC TTGTCAGCTT
GCGATTACTG ACCTTGATCA AGAAGAATGG TCAATCGGTG ATATTAAAGA AGAGCAAATT
GAGTCGATCG AGTTTGGTCG TATTGCTGCC ACTCAAGCCA AACAAGTTAT CATCCAAAAG
ATTCGTGAAG CTGAGCGTAA TTTAGTAGCA GATGCTTTTG AGCCACGTGT TGGCGAGATG
ATGTATGGCG AAGTCAAAAA ACAAACCCGT GATGGTTACA TCATTGACTT AGGTGATAAT
GCTGAGGGTT ATCTATCACG TGATCAGATG CTACCACGTG AGCAATTGCG CGCAAAATCG
CGTATCAATG CCATCTTATA TCATGTGAAC CGTGAAAATC GCGGCGCTCA GTTGCTTCTA
TCACGTACTC ATCCTGAAAT GCTCTCGGCA TTGATGCAAA AAGAAGTGCC TGAGATTGCA
GAACAAATTA TCGAAATCCG TAACGTCGCG CGCTTACCGG GTACTCGTGC TAAAATAGCG
GTTAAGACCA ACGATCATCG TATCGATCCG GTTGGTGCTT GTATTGGTAT GCGTGGTACA
CGTATCCAAG CAGTACAGCA AGAGCTTGAT GGCGAGCGTA TTGATGTAGT GGTTTGGTCA
GATGATCCTG CCCAATTTAT CATCAGCGCT TTAGAGCCTG CAGACGTAAG CAGTATCATC
CTAGATGAAG ATACGCAAAC GGCTGATATT ATCTTTAGTA CCAATGATCA GCTAGCACGT
GCGATTGGCT CACAAGGTCA AAACGTACGC TTAGCTTCTG AGCTGACCGG CTATAAGCTA
AATATGATGC TAGAAGAAGA GTATCAGCAG CGTCAAGCAA ACGAATCTAA AGCATTCATC
GAACTATTCT ATGAACGCCT AGAAGTGGAT AAAGACCTAG CACAAGCGCT TGTCGATATT
GGTTTCACCA GTATTGAAGA AGTGGCTTAT GTACCTGTCG AAACCTTCTA CGATATTGAA
GGATTAGATG ATGAAGCGAT TGATATGATC CAAGAGCGTG CGAAAGAAGT CGTTATTGCA
GACGAATTGG TCAAACAACA GAACATGAAA GAGCCAAGTC AGGAACTACA AGATCTTGAA
GGAATGACAG TCAGTTGGGC TTATAAAATG GCTCAAAAAG ACATCATTAC GGTGGATGAC
TTGGCAGAAC AAGCCGTCTT CGACTTAGAA GATATCGAAG ACTTAGATAC TGAAACCGCA
GGAAAACTCA TCATGAAAGC TCGGGAATCT TGGTTCAATG AATAA
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| Protein sequence | MSREILTVVE TVSNEKGLNP EDIFEAIEDA LVVSTKKKVY TDQPEVEVRV SIDRTTGDYD
TYRYWTVVAD EDHEMPACQL AITDLDQEEW SIGDIKEEQI ESIEFGRIAA TQAKQVIIQK
IREAERNLVA DAFEPRVGEM MYGEVKKQTR DGYIIDLGDN AEGYLSRDQM LPREQLRAKS
RINAILYHVN RENRGAQLLL SRTHPEMLSA LMQKEVPEIA EQIIEIRNVA RLPGTRAKIA
VKTNDHRIDP VGACIGMRGT RIQAVQQELD GERIDVVVWS DDPAQFIISA LEPADVSSII
LDEDTQTADI IFSTNDQLAR AIGSQGQNVR LASELTGYKL NMMLEEEYQQ RQANESKAFI
ELFYERLEVD KDLAQALVDI GFTSIEEVAY VPVETFYDIE GLDDEAIDMI QERAKEVVIA
DELVKQQNMK EPSQELQDLE GMTVSWAYKM AQKDIITVDD LAEQAVFDLE DIEDLDTETA
GKLIMKARES WFNE
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