Gene Pcryo_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0068 
Symbol 
ID4034192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp76476 
End bp77699 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content42% 
IMG OID637972508 
Producttype II secretion system protein 
Protein accessionYP_579336 
Protein GI93004899 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000163403 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.563347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG CTAAGACCGA CATGCTGTTA GACTTTGTCT ATGATGGGGT AAATCGGCGC 
GGGCAAAAGG TAAAAGGTGA GACGACCAGT CGTAGCTTAG AGCTTGCCAA AGCCACGTTG
CGCAAACAAG GTATTACGGT TAAAGGTATC AAGAAAAAGC CAAAACCCTT ATACACCTTT
AAGAAGTCCA TCAAGCCTAT CGATATTGCT ATTTTTGCAC GTCAATTGGC AACTATGATG
AAAGCTGGGG TGCCATTGAC TCAATCCTTT GAGATTGTCG CGGACTCTCT AGATAATCCG
AGTATGAAAG ACTTGGTATT ACAAATTAAA GCCGATATTG AAGCTGGTGG TACTTTTGCA
TCGGCATTAC GTCGCCATCC CCGCTATTTT GACGATCTTT TTTGCTCGCT TGTTGATTCT
GGCGAGCAGT CAGGTGCGTT AGAAACCATG CTAGAGCGAG TTGCGACTTA TAAAGAGAAA
AGCGAGCTGT TAAAAGCTAA AATTAAAAAA GCTATGAAAT ATCCTATCGC GGTCGTTGTA
GTTGCTATTA TTGTCACCAT TATTCTGCTT GTTAAAGTCG TTCCAGTGTT TGCTGATTTA
TTTAGCTCTT TTGGTGCAGA ATTACCTGCT TTTACCCAAA TGGTCGTAGG TATGTCTGAG
TGGATGCAAG CATGGTGGTT CATCTTAATT GTATTTATTG GTGGCGCAAT TATCGGCTTT
TCAGAAGCTA AGAAGCGTTC AAAGAAATTT CGTGATGTCT TAGACCGTGC GGTATTAAAA
GCCCCAATAT TTGGCAATAT CGCTTACCAA GCGGTGATTG CGCGTTTTGC TCGTACGCTG
TCTACAACTT TTGCTGCCGG CGTACCGCTT ATTGATGCGC TCGATTCAAC TGCTGGCGCG
GCCAATAATG TAGTATTTTA TAACGCTATT CAGCAAATCA AAAATGACGT CTCTACGGGA
CAACAATTAC AGTTTTCCAT ACGTTCAACC AATTTATTTC CAAGCCTTGC TATTCAAATG
GTAGGTATCG GTGAAGAGTC TGGTAGCTTA GAAGAGATGC TCGATAAAGT AGCAGTTTAT
TATGAAAACG AAGTTGATAA CGCTGTTGAT GGTTTGACCA GCTTGATGGA GCCGCTTATT
ATGGCGGTAC TTGGCGTATT AGTTGGTGGT TTGGTCATTG CCATGTACTT ACCAATCTTC
CAGATGGGCT CAGTAGTAGG TTGA
 
Protein sequence
MAKAKTDMLL DFVYDGVNRR GQKVKGETTS RSLELAKATL RKQGITVKGI KKKPKPLYTF 
KKSIKPIDIA IFARQLATMM KAGVPLTQSF EIVADSLDNP SMKDLVLQIK ADIEAGGTFA
SALRRHPRYF DDLFCSLVDS GEQSGALETM LERVATYKEK SELLKAKIKK AMKYPIAVVV
VAIIVTIILL VKVVPVFADL FSSFGAELPA FTQMVVGMSE WMQAWWFILI VFIGGAIIGF
SEAKKRSKKF RDVLDRAVLK APIFGNIAYQ AVIARFARTL STTFAAGVPL IDALDSTAGA
ANNVVFYNAI QQIKNDVSTG QQLQFSIRST NLFPSLAIQM VGIGEESGSL EEMLDKVAVY
YENEVDNAVD GLTSLMEPLI MAVLGVLVGG LVIAMYLPIF QMGSVVG