Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0068 |
Symbol | |
ID | 4034192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 76476 |
End bp | 77699 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637972508 |
Product | type II secretion system protein |
Protein accession | YP_579336 |
Protein GI | 93004899 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000163403 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.563347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAG CTAAGACCGA CATGCTGTTA GACTTTGTCT ATGATGGGGT AAATCGGCGC GGGCAAAAGG TAAAAGGTGA GACGACCAGT CGTAGCTTAG AGCTTGCCAA AGCCACGTTG CGCAAACAAG GTATTACGGT TAAAGGTATC AAGAAAAAGC CAAAACCCTT ATACACCTTT AAGAAGTCCA TCAAGCCTAT CGATATTGCT ATTTTTGCAC GTCAATTGGC AACTATGATG AAAGCTGGGG TGCCATTGAC TCAATCCTTT GAGATTGTCG CGGACTCTCT AGATAATCCG AGTATGAAAG ACTTGGTATT ACAAATTAAA GCCGATATTG AAGCTGGTGG TACTTTTGCA TCGGCATTAC GTCGCCATCC CCGCTATTTT GACGATCTTT TTTGCTCGCT TGTTGATTCT GGCGAGCAGT CAGGTGCGTT AGAAACCATG CTAGAGCGAG TTGCGACTTA TAAAGAGAAA AGCGAGCTGT TAAAAGCTAA AATTAAAAAA GCTATGAAAT ATCCTATCGC GGTCGTTGTA GTTGCTATTA TTGTCACCAT TATTCTGCTT GTTAAAGTCG TTCCAGTGTT TGCTGATTTA TTTAGCTCTT TTGGTGCAGA ATTACCTGCT TTTACCCAAA TGGTCGTAGG TATGTCTGAG TGGATGCAAG CATGGTGGTT CATCTTAATT GTATTTATTG GTGGCGCAAT TATCGGCTTT TCAGAAGCTA AGAAGCGTTC AAAGAAATTT CGTGATGTCT TAGACCGTGC GGTATTAAAA GCCCCAATAT TTGGCAATAT CGCTTACCAA GCGGTGATTG CGCGTTTTGC TCGTACGCTG TCTACAACTT TTGCTGCCGG CGTACCGCTT ATTGATGCGC TCGATTCAAC TGCTGGCGCG GCCAATAATG TAGTATTTTA TAACGCTATT CAGCAAATCA AAAATGACGT CTCTACGGGA CAACAATTAC AGTTTTCCAT ACGTTCAACC AATTTATTTC CAAGCCTTGC TATTCAAATG GTAGGTATCG GTGAAGAGTC TGGTAGCTTA GAAGAGATGC TCGATAAAGT AGCAGTTTAT TATGAAAACG AAGTTGATAA CGCTGTTGAT GGTTTGACCA GCTTGATGGA GCCGCTTATT ATGGCGGTAC TTGGCGTATT AGTTGGTGGT TTGGTCATTG CCATGTACTT ACCAATCTTC CAGATGGGCT CAGTAGTAGG TTGA
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Protein sequence | MAKAKTDMLL DFVYDGVNRR GQKVKGETTS RSLELAKATL RKQGITVKGI KKKPKPLYTF KKSIKPIDIA IFARQLATMM KAGVPLTQSF EIVADSLDNP SMKDLVLQIK ADIEAGGTFA SALRRHPRYF DDLFCSLVDS GEQSGALETM LERVATYKEK SELLKAKIKK AMKYPIAVVV VAIIVTIILL VKVVPVFADL FSSFGAELPA FTQMVVGMSE WMQAWWFILI VFIGGAIIGF SEAKKRSKKF RDVLDRAVLK APIFGNIAYQ AVIARFARTL STTFAAGVPL IDALDSTAGA ANNVVFYNAI QQIKNDVSTG QQLQFSIRST NLFPSLAIQM VGIGEESGSL EEMLDKVAVY YENEVDNAVD GLTSLMEPLI MAVLGVLVGG LVIAMYLPIF QMGSVVG
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