Gene Pcryo_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0067 
Symbol 
ID4034191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp75551 
End bp76450 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content42% 
IMG OID637972507 
Productprepilin peptidase 
Protein accessionYP_579335 
Protein GI93004898 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000398253 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.330687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTTA TACAGTTACT ACAAGAAAAT ATGACCATTG CTTTGGTCGT ATTTGGTCTA 
CTAGGGCTGT GCGTCGGTAG CTTCTTAAAC GTGGTAATTC ATCGCACTCC ATTGATAATG
GTATCGGCTT GGCGAAAAGA GTGTAGCCAG TTTATGTATG AGCAAGCAGA TATGCCGCGT
GAGCATACGA TGCCACTAGT TAATATTGTT GCCACTGATA CACCTATTAC CTTAAGTAAA
CCAGCATCGC GCTGCCCGCA CTGTGCCCAC AAAATTAAGT GGTATGAAAA CATACCTTTA
ATTAGCTGGA TAGTACTACG CGGACGTTGC TCAGAGTGCA AAGCGGCTAT CGGGCTTCGA
TATCCTATCG TTGAGCTGGT CACTGCTCTG CTATCTGCAC TAGTCATTTA TCATTTTGGC
GTTAATATGG TAGGGCTGTC GGCATTAGTT TTAGTCTGGA CACTCATCGC CTTAACTGGT
ATCGATTTTG ATACTCAGTT ATTGCCTGAC CGCTTAACTT TTCCATTAGC AGGGCTAGGA
TTGGCGGTCA ATTCACAAGG TTGGTTTGTG CCCCCTACTC AGTCGATATG GGGCTTGTTA
TTGGGATTTT TATCGTTATG GATAGTGGTC AAGATATTTT ATTTAATCAC CAAAAAGCAT
GGCATGGGAC AAGGCGACTT TAAATTATTG GCAGTACTGG GTGCGTGGCT TGGACCTATG
ATGTTACCCT TGATTATTTT ATTATCATCA TTGCTCGGCT CTATCGTTGG GCTTATCTTG
ATGAAAAAAC AAGGCGAGAG CAAGCCTTTT GCCTTTGGTC CTTATATTGC CATTGCTGGT
ATTGTGGCAT TGTTATACGG CTCAGATATC GTTAATTGGT ATTTAGGTAT GTATACTTAA
 
Protein sequence
MQFIQLLQEN MTIALVVFGL LGLCVGSFLN VVIHRTPLIM VSAWRKECSQ FMYEQADMPR 
EHTMPLVNIV ATDTPITLSK PASRCPHCAH KIKWYENIPL ISWIVLRGRC SECKAAIGLR
YPIVELVTAL LSALVIYHFG VNMVGLSALV LVWTLIALTG IDFDTQLLPD RLTFPLAGLG
LAVNSQGWFV PPTQSIWGLL LGFLSLWIVV KIFYLITKKH GMGQGDFKLL AVLGAWLGPM
MLPLIILLSS LLGSIVGLIL MKKQGESKPF AFGPYIAIAG IVALLYGSDI VNWYLGMYT