Gene Pcryo_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0065 
Symbol 
ID4034189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp74042 
End bp74812 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content47% 
IMG OID637972505 
ProductRNA methyltransferase TrmH, group 3 
Protein accessionYP_579333 
Protein GI93004896 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000946676 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.572135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC CTACCTATTT TTATGGCATT CATGCCATTG ATGCCTTGCT CGAATACCGT 
CCTCTTGATG GACTGAGCTT GTTTGTACAG CAAGGGCGTG AGACTGACAG TCATGTACAG
TCTATTATGG CGCAAGCACG TGATAATGGC ATCAGTATTC AACCAACGCA AAAAGACAAA
CTTACTCAGC TGTGTGGTAG CCCGCAACAT CAAGGCGTAG TGCTAAACGC CCGTCCTTTA
GGCTTTGCTG ATGAAGGTTT GCTAGATACG CTTGCTGGTC GAGATGATTG TTTGTTACTG
GTACTAGACC AAATTACGGA CGCCCATAAT TTTGGCGCTT GTTTGCGTAC AGCAGTAGCC
ATGGGTGTCG ATGCAGTCAT TTGTCCGAAA CATCATGCAG CTAGCTTGAC GCCAACGGTT
GCCAAAGTAT CAGTCGGCGC GGCTGAAATG ATGCCTATTG TTAGCGTAAC CAATCTGGCA
CGCACGCTGA CAAAAATTAA AAATGCCGGC GTTTTTGTGT TTGGTACCGC TCTTAATGCC
AATGCCAAAC CAATCCATGC TGCAGATCTG ACTGGTAAGA CGGCTATTAT CATGGGTTCA
GAAGGTGAGG GGATGCGTCG CCTGACAACA GAAAGCTGCG ATGAGCTGGT TTATATTCCG
ATGTCAGGCA ACGAGCATGG CAACTTGCAA AGCTTGAATG TCAGTGTGGC GACAGGTATG
GCTTTGTATG AGATTAATCG GCAGCGAACT TTAGCTGCTG GGCAAGCTTA A
 
Protein sequence
MAKPTYFYGI HAIDALLEYR PLDGLSLFVQ QGRETDSHVQ SIMAQARDNG ISIQPTQKDK 
LTQLCGSPQH QGVVLNARPL GFADEGLLDT LAGRDDCLLL VLDQITDAHN FGACLRTAVA
MGVDAVICPK HHAASLTPTV AKVSVGAAEM MPIVSVTNLA RTLTKIKNAG VFVFGTALNA
NAKPIHAADL TGKTAIIMGS EGEGMRRLTT ESCDELVYIP MSGNEHGNLQ SLNVSVATGM
ALYEINRQRT LAAGQA