Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0006 |
Symbol | |
ID | 4034874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 6021 |
End bp | 8636 |
Gene Length | 2616 bp |
Protein Length | 871 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637972446 |
Product | DNA gyrase, B subunit |
Protein accession | YP_579274 |
Protein GI | 93004837 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.44586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00403609 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGACT CATTACCTAC CGACCACCAG CAATTAACGT CAGACAGCGC AGTTGAGACT ATTGCCGCCG CTGTCGCTCC TGAGGTATTA CCCTCTGATT ACAGCTCGAA AGACATCCGA GTACTGCGCG GACTAGAAGC GGTGCGCGTG CGTCCTGGTA TGTATATTGG TGATACCGAT GATGGTACTG GCTTGCATCA TATGGTCTTT GAGGTGGTGG ATAACTCTAT CGATGAAGCG CTTGCTGGTC ATTGTGATCA AATTGATATC ATTATCCACG AAGATGAATC TGTCAGCGTG ATGGATAATG GTCGCGGTGT CCCTGTTGAC ATTCATCCAG AAGAAGGTGT GTCTGCCGCA CAGGTTATTA TGACGGTACT GCATGCTGGT GGTAAGTTTG ATGATAATAG CTATAAAGTC TCTGGCGGTC TACATGGCGT TGGCGTTTCA GTCGTTAATG CATTATCCAA AAAGCTTGAG ATGAATATCT GGCGTGAAGG TTATCATTAT CATCAGACTT ATACTGATGG TGTGCCTGAT GGCGATATTC AGCAAATGGA AGCGACAGAT CAAACTGGCA CACAAATCCG TTTTTACCCT AGCAATGACG TATTTACCGG TACTATTTTT GAATATGATA TTTTAGCCAA GCGTTTACGT GAGCTGTCAT TTTTGAACTC AGGCGTACGT ATTGTTTTGA CTGATGAACG TATTGATAAG CGTCATGAGT TTGAACACAA AGGTGGATTG TCAGAGTTTG TCAGCTATAT TAATGCTGGT AAAGATGGCA TCAATGATGT GTTCCATTTT ATCAGTAATC AAGATGATGG TATCAGTGTC GAAGTGGCGT TGCAGTGGAC AGATACTTAT AACGAAAAGG TGTTTTGTTT TACCAATAAC ATTCCACAAC GTGATGGCGG CACGCATTTA TCTGGCTTCC GCTCAGCACT CACGCGTTGT TTGAATACCT ATATGGACCG TGAAAATCTT TTCAAAAAAG AGAAAGTGGC TGCGACTGGT GATGATGCCC GTGAAGGTCT AACGGCTATC GTATCTGTTA AAGTTCCAGA TCCTAAGTTT TCAAGTCAAA CCAAAGATAA GTTGGTATCA AGTGAAGTAA AATCTGCCGT CGAATCAGCA ATGCACGATA AGTTTAATGA TTATCTGCAA GAAAATCCAA GCGCTGGTAA ATTAATTGCC GGTAAAATCA TTGATGCTGC TCGTGCTCGT GATGCCGCTC GTAAAGCGCG TGAGATGACT CGTCGTAAGA CCACATTAGA TATCGCAGGT CTGCCGGGTA AATTGGCAGA TTGCCAAGAA AAAGATCCTG CATTATCAGA GCTATACATT GTAGAAGGGG ACTCTGCTGG CGGTTCAGCC AAGCAAGGTC GTAGCCGTAA AACGCAAGCA ATTTTGCCTT TAAAAGGTAA AATCCTAAAC GTTGAGCGCG CGCGTTTTGA CAAGATGTTA TCGTCACAAG AAGTCGGTAA TCTAATTACT GCGCTTGGTT GTGGTATTGG TCCTGATGAA TATAATCCTG ATAAAGTTCG CTATCATAAA ATCATCATCA TGACCGATGC GGACGTTGAT GGTTCACATA TTCGTACCCT TTTATTAACC TTTTTCTTCC GTCAAACGCC TGAATTGATT GAACGTGGTT ATATTTATAT TGCTCAGCCA CCGCTTTATA AAGTCAAAAA AGGTCGTCAA GAGCTGTATC TAAAAGATGA TGAGGCACTT AAAGCGTATT TATTATCTTC AACGATTGAT AATACTAGGC TGCATATCAG TGCTGATGCT CCTGCGATTA CTGGTCAAGC GTTAGAGACT TTATTAAACG ATTATAATCA AACGCAGCTT ATTAAAGCGC GTTTGCAGAT TCGTTATCCA GCCGTTTTGT TGGATGCCCT AACGCATACA CCAAAGCTTA GTACTGATAT TACGTATGAT AAAGATGCAA TGCAAGCATG GAAAGACACG CTACAGACCC AGCTTGAGCA CTTTGGTAGT GACTTAAATC CTGAGATTGA GCTGGTGAAT ATCCATGCAC CACAGCCTAA AAATATGGAT GCCGCTGCCG CTGATTTACT GGGTATGAGA CCTGTCGTTG CCGTTGAAGA AAGTGATAGC TCTGACACTG AAGCGGTAGT CGCAAAAGCA CAATGGCTGC CACGTATTAC GGTCTATGTG CATCAGTTGG CCCATCATTA TTTGCTCGAT GCCAGCTTTA TCAATTCGGG CGAGTATACT AAGCTGCTGC GCTTATCAGC TGAATGGAAT ACCTTGCTTG ATGAAGATGC CTTTATCCGC CGTGACGCAA CAGCGGGTAC AACCAAAGAC ATCCCAATAC GTGACTTCGA TTATTTGTGG CAGCAAATGA TGCTTGACGC GCGTCGTGGT CTAGCGATCC AGCGCTATAA AGGATTGGGC GAGATGAATG CCGATCAGCT GTGGGATACT ACCATGGATC CTGAAAACCG CCGTATGCTG CGCGTCAATA TTGAAGATGC TATCGCAGCG GATCATATGT TCACCTGCTT GATGGGTGAT CATGTAGAGC CGCGTCGTAT CTTTATCGAA GAAAATGCGT TAACGGTTTC TAATTTAGAT ATCTAA
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Protein sequence | MSDSLPTDHQ QLTSDSAVET IAAAVAPEVL PSDYSSKDIR VLRGLEAVRV RPGMYIGDTD DGTGLHHMVF EVVDNSIDEA LAGHCDQIDI IIHEDESVSV MDNGRGVPVD IHPEEGVSAA QVIMTVLHAG GKFDDNSYKV SGGLHGVGVS VVNALSKKLE MNIWREGYHY HQTYTDGVPD GDIQQMEATD QTGTQIRFYP SNDVFTGTIF EYDILAKRLR ELSFLNSGVR IVLTDERIDK RHEFEHKGGL SEFVSYINAG KDGINDVFHF ISNQDDGISV EVALQWTDTY NEKVFCFTNN IPQRDGGTHL SGFRSALTRC LNTYMDRENL FKKEKVAATG DDAREGLTAI VSVKVPDPKF SSQTKDKLVS SEVKSAVESA MHDKFNDYLQ ENPSAGKLIA GKIIDAARAR DAARKAREMT RRKTTLDIAG LPGKLADCQE KDPALSELYI VEGDSAGGSA KQGRSRKTQA ILPLKGKILN VERARFDKML SSQEVGNLIT ALGCGIGPDE YNPDKVRYHK IIIMTDADVD GSHIRTLLLT FFFRQTPELI ERGYIYIAQP PLYKVKKGRQ ELYLKDDEAL KAYLLSSTID NTRLHISADA PAITGQALET LLNDYNQTQL IKARLQIRYP AVLLDALTHT PKLSTDITYD KDAMQAWKDT LQTQLEHFGS DLNPEIELVN IHAPQPKNMD AAAADLLGMR PVVAVEESDS SDTEAVVAKA QWLPRITVYV HQLAHHYLLD ASFINSGEYT KLLRLSAEWN TLLDEDAFIR RDATAGTTKD IPIRDFDYLW QQMMLDARRG LAIQRYKGLG EMNADQLWDT TMDPENRRML RVNIEDAIAA DHMFTCLMGD HVEPRRIFIE ENALTVSNLD I
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