Gene Pcryo_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0006 
Symbol 
ID4034874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp6021 
End bp8636 
Gene Length2616 bp 
Protein Length871 aa 
Translation table11 
GC content44% 
IMG OID637972446 
ProductDNA gyrase, B subunit 
Protein accessionYP_579274 
Protein GI93004837 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.44586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00403609 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGACT CATTACCTAC CGACCACCAG CAATTAACGT CAGACAGCGC AGTTGAGACT 
ATTGCCGCCG CTGTCGCTCC TGAGGTATTA CCCTCTGATT ACAGCTCGAA AGACATCCGA
GTACTGCGCG GACTAGAAGC GGTGCGCGTG CGTCCTGGTA TGTATATTGG TGATACCGAT
GATGGTACTG GCTTGCATCA TATGGTCTTT GAGGTGGTGG ATAACTCTAT CGATGAAGCG
CTTGCTGGTC ATTGTGATCA AATTGATATC ATTATCCACG AAGATGAATC TGTCAGCGTG
ATGGATAATG GTCGCGGTGT CCCTGTTGAC ATTCATCCAG AAGAAGGTGT GTCTGCCGCA
CAGGTTATTA TGACGGTACT GCATGCTGGT GGTAAGTTTG ATGATAATAG CTATAAAGTC
TCTGGCGGTC TACATGGCGT TGGCGTTTCA GTCGTTAATG CATTATCCAA AAAGCTTGAG
ATGAATATCT GGCGTGAAGG TTATCATTAT CATCAGACTT ATACTGATGG TGTGCCTGAT
GGCGATATTC AGCAAATGGA AGCGACAGAT CAAACTGGCA CACAAATCCG TTTTTACCCT
AGCAATGACG TATTTACCGG TACTATTTTT GAATATGATA TTTTAGCCAA GCGTTTACGT
GAGCTGTCAT TTTTGAACTC AGGCGTACGT ATTGTTTTGA CTGATGAACG TATTGATAAG
CGTCATGAGT TTGAACACAA AGGTGGATTG TCAGAGTTTG TCAGCTATAT TAATGCTGGT
AAAGATGGCA TCAATGATGT GTTCCATTTT ATCAGTAATC AAGATGATGG TATCAGTGTC
GAAGTGGCGT TGCAGTGGAC AGATACTTAT AACGAAAAGG TGTTTTGTTT TACCAATAAC
ATTCCACAAC GTGATGGCGG CACGCATTTA TCTGGCTTCC GCTCAGCACT CACGCGTTGT
TTGAATACCT ATATGGACCG TGAAAATCTT TTCAAAAAAG AGAAAGTGGC TGCGACTGGT
GATGATGCCC GTGAAGGTCT AACGGCTATC GTATCTGTTA AAGTTCCAGA TCCTAAGTTT
TCAAGTCAAA CCAAAGATAA GTTGGTATCA AGTGAAGTAA AATCTGCCGT CGAATCAGCA
ATGCACGATA AGTTTAATGA TTATCTGCAA GAAAATCCAA GCGCTGGTAA ATTAATTGCC
GGTAAAATCA TTGATGCTGC TCGTGCTCGT GATGCCGCTC GTAAAGCGCG TGAGATGACT
CGTCGTAAGA CCACATTAGA TATCGCAGGT CTGCCGGGTA AATTGGCAGA TTGCCAAGAA
AAAGATCCTG CATTATCAGA GCTATACATT GTAGAAGGGG ACTCTGCTGG CGGTTCAGCC
AAGCAAGGTC GTAGCCGTAA AACGCAAGCA ATTTTGCCTT TAAAAGGTAA AATCCTAAAC
GTTGAGCGCG CGCGTTTTGA CAAGATGTTA TCGTCACAAG AAGTCGGTAA TCTAATTACT
GCGCTTGGTT GTGGTATTGG TCCTGATGAA TATAATCCTG ATAAAGTTCG CTATCATAAA
ATCATCATCA TGACCGATGC GGACGTTGAT GGTTCACATA TTCGTACCCT TTTATTAACC
TTTTTCTTCC GTCAAACGCC TGAATTGATT GAACGTGGTT ATATTTATAT TGCTCAGCCA
CCGCTTTATA AAGTCAAAAA AGGTCGTCAA GAGCTGTATC TAAAAGATGA TGAGGCACTT
AAAGCGTATT TATTATCTTC AACGATTGAT AATACTAGGC TGCATATCAG TGCTGATGCT
CCTGCGATTA CTGGTCAAGC GTTAGAGACT TTATTAAACG ATTATAATCA AACGCAGCTT
ATTAAAGCGC GTTTGCAGAT TCGTTATCCA GCCGTTTTGT TGGATGCCCT AACGCATACA
CCAAAGCTTA GTACTGATAT TACGTATGAT AAAGATGCAA TGCAAGCATG GAAAGACACG
CTACAGACCC AGCTTGAGCA CTTTGGTAGT GACTTAAATC CTGAGATTGA GCTGGTGAAT
ATCCATGCAC CACAGCCTAA AAATATGGAT GCCGCTGCCG CTGATTTACT GGGTATGAGA
CCTGTCGTTG CCGTTGAAGA AAGTGATAGC TCTGACACTG AAGCGGTAGT CGCAAAAGCA
CAATGGCTGC CACGTATTAC GGTCTATGTG CATCAGTTGG CCCATCATTA TTTGCTCGAT
GCCAGCTTTA TCAATTCGGG CGAGTATACT AAGCTGCTGC GCTTATCAGC TGAATGGAAT
ACCTTGCTTG ATGAAGATGC CTTTATCCGC CGTGACGCAA CAGCGGGTAC AACCAAAGAC
ATCCCAATAC GTGACTTCGA TTATTTGTGG CAGCAAATGA TGCTTGACGC GCGTCGTGGT
CTAGCGATCC AGCGCTATAA AGGATTGGGC GAGATGAATG CCGATCAGCT GTGGGATACT
ACCATGGATC CTGAAAACCG CCGTATGCTG CGCGTCAATA TTGAAGATGC TATCGCAGCG
GATCATATGT TCACCTGCTT GATGGGTGAT CATGTAGAGC CGCGTCGTAT CTTTATCGAA
GAAAATGCGT TAACGGTTTC TAATTTAGAT ATCTAA
 
Protein sequence
MSDSLPTDHQ QLTSDSAVET IAAAVAPEVL PSDYSSKDIR VLRGLEAVRV RPGMYIGDTD 
DGTGLHHMVF EVVDNSIDEA LAGHCDQIDI IIHEDESVSV MDNGRGVPVD IHPEEGVSAA
QVIMTVLHAG GKFDDNSYKV SGGLHGVGVS VVNALSKKLE MNIWREGYHY HQTYTDGVPD
GDIQQMEATD QTGTQIRFYP SNDVFTGTIF EYDILAKRLR ELSFLNSGVR IVLTDERIDK
RHEFEHKGGL SEFVSYINAG KDGINDVFHF ISNQDDGISV EVALQWTDTY NEKVFCFTNN
IPQRDGGTHL SGFRSALTRC LNTYMDRENL FKKEKVAATG DDAREGLTAI VSVKVPDPKF
SSQTKDKLVS SEVKSAVESA MHDKFNDYLQ ENPSAGKLIA GKIIDAARAR DAARKAREMT
RRKTTLDIAG LPGKLADCQE KDPALSELYI VEGDSAGGSA KQGRSRKTQA ILPLKGKILN
VERARFDKML SSQEVGNLIT ALGCGIGPDE YNPDKVRYHK IIIMTDADVD GSHIRTLLLT
FFFRQTPELI ERGYIYIAQP PLYKVKKGRQ ELYLKDDEAL KAYLLSSTID NTRLHISADA
PAITGQALET LLNDYNQTQL IKARLQIRYP AVLLDALTHT PKLSTDITYD KDAMQAWKDT
LQTQLEHFGS DLNPEIELVN IHAPQPKNMD AAAADLLGMR PVVAVEESDS SDTEAVVAKA
QWLPRITVYV HQLAHHYLLD ASFINSGEYT KLLRLSAEWN TLLDEDAFIR RDATAGTTKD
IPIRDFDYLW QQMMLDARRG LAIQRYKGLG EMNADQLWDT TMDPENRRML RVNIEDAIAA
DHMFTCLMGD HVEPRRIFIE ENALTVSNLD I