| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0005 |
|---|
| Symbol | |
|---|
| ID | 4034873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 4313 |
|---|
| End bp | 5521 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637972445 |
|---|
| Product | DNA replication and repair protein RecF |
|---|
| Protein accession | YP_579273 |
|---|
| Protein GI | 93004836 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.478589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000458598 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAC GTCTACAAAT CTCTCACTTG CGCAATTTAA CGCACATCAA TTTATCGCCT
GCAGCTTGTA ATGTTATTAT CGGCGCTAAT GGCAGTGGTA AAACCTCGTT ACTTGAAGCT
ATATTCTTGT TATCAAGAGG CAAAAGTTTC CGTCATCATC AGCCTAAACG CTATATCCAA
CATTATCAAG AGTCTGCCAC TATACATGCT AATCTCAATG ACAGCCGTAC CTTAGCTATC
CAAAAGAAAG CAGATGCAAC GACTATTCTG CGTTTAAATC AAACCACCGT TTACAACCAA
AGCATCTTGA CCGAGCAGCT ACCAACATTG CTTATAGATC CATCAACGAT GGACATGCTA
GAGCAGGGTA GTGCCAGTCG TCGCCAGTTA TTGGATTGGT TAGTGTTTCA CATGAAACAA
GGCTTCCATT CCCAGTGGGT TGCTTATCAA CGTCTTCTAA AACAGCGCAA TAGTTTGTTA
AAGCAACGGC GTCATTTGAC TCAGGTTCAG CTTGCTGAGC TTAAGGCTTG GGATAAAGGG
CTTTCCAGTC ATGCAGCGCT GATTCATCAC TACCGTCAAG CTATATTTGA AGCTTGGCAG
CCTTATTTTT CTAAGAGCAT TGCACAGTTA TTGCCTGCTT ATGCTGAGCA GTTAAGCTTA
AGTTACAATG CGGGCTACGA TACTGGTATA GCGCTCGACA TACAGCTTAA TGAACGCCTA
GAGCAGGATT TGCAGTTGGG TTATACCCGT ATTGGTAACC ATCGTGCTGA TATTCACGTG
CATTGGCGCT CGATAGGCTC AAGACAGATA GCTGATGAGA ATCTAAACTC ACCTTTATCA
GCGGATTCGA CTGTTAAACT GCCTATTTTA AAAGAGCAAG CAGCTAATAT TTTATCTCGT
GGAGAAAAAA AACTATTGAT TACGGCATTG CGTTTATCAC AATTACCATT GTTGCTTAAT
GCTAAAACTA ATAGCGAGCT ATATAACAGT GACGCTAAAT TAAGTGCTAC ACCAGTGGTA
TTACTAGATG ATATTACCGC AGAGCTAGAT AATAAGGCGA TAGAGATTTT ATTATCAACA
TTAGCACAGC TACCATGTCA GGTATTTGTG ACCAGTTTGA CAGACAGTAT TTTACCTTTA
GTACATGAAT ATTGGGAAAA ATCTCAAGTG TTTCACATGA AACAAGGAGG TATTTTACCA
GCTCAGTAG
|
|---|
| Protein sequence | MIERLQISHL RNLTHINLSP AACNVIIGAN GSGKTSLLEA IFLLSRGKSF RHHQPKRYIQ
HYQESATIHA NLNDSRTLAI QKKADATTIL RLNQTTVYNQ SILTEQLPTL LIDPSTMDML
EQGSASRRQL LDWLVFHMKQ GFHSQWVAYQ RLLKQRNSLL KQRRHLTQVQ LAELKAWDKG
LSSHAALIHH YRQAIFEAWQ PYFSKSIAQL LPAYAEQLSL SYNAGYDTGI ALDIQLNERL
EQDLQLGYTR IGNHRADIHV HWRSIGSRQI ADENLNSPLS ADSTVKLPIL KEQAANILSR
GEKKLLITAL RLSQLPLLLN AKTNSELYNS DAKLSATPVV LLDDITAELD NKAIEILLST
LAQLPCQVFV TSLTDSILPL VHEYWEKSQV FHMKQGGILP AQ
|
|---|
| |