Gene Nham_4020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4020 
Symbol 
ID4032817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp4386591 
End bp4387217 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content61% 
IMG OID637972377 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_579149 
Protein GI92119420 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAT CCGCGCGCCT GCATGCCGAC GGCGTGATGC GCTGCCCGTG GCCCGGCGAC 
GACCCGCTCT ACCTCGCCTA TCACGACACC GAGTGGGGCA TACCCGAATA CGACGATCGC 
GCGCTGTTCG AAAAGCTGAT CCTCGACGGC TTTCAGGCTG GCCTGTCGTG GATCACGATT 
TTGCGCAAGC GCGACAACTT CCGCCGCGCC TTCGACGATT TCAACCCCGA GACAATCGCC 
CGCTACGGCG AGAACAAGAT CCACGCGCTG ATGAACGATG CCGGCATCGT GCGCAATCGG 
GCGAAAATCG AGGGCACTGT GACCAGCGCG AAATCCTATC TCGCGATCAT GGAGCAGGGT 
CCGGGCTTTT CCGCATTGCT GTGGGACTTC ATGGACGGCA GGCCGAAGGT CAACCGGTTC 
AAGACCACGG CGAGCGTACC TGCCTCGACG GCGCTGTCGA TCACGATATC GAAGGAACTG 
GCATCGCGCG GATTCAAGTT CGTCGGGCCC ACGATCGTGT ATGCCTTCAT GCAGGCGACC 
GGCATGGTCA ACGACCATCT GGTGGCCTGC CATTGCCATG AGACATGCGG CAAGCAGACG 
CGCAAGCCGC GTTTCAAGAC GAAATGA
 
Protein sequence
MTQSARLHAD GVMRCPWPGD DPLYLAYHDT EWGIPEYDDR ALFEKLILDG FQAGLSWITI 
LRKRDNFRRA FDDFNPETIA RYGENKIHAL MNDAGIVRNR AKIEGTVTSA KSYLAIMEQG 
PGFSALLWDF MDGRPKVNRF KTTASVPAST ALSITISKEL ASRGFKFVGP TIVYAFMQAT 
GMVNDHLVAC HCHETCGKQT RKPRFKTK