Gene Nham_4018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4018 
Symbol 
ID4032815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4384212 
End bp4385606 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content66% 
IMG OID637972375 
Productdihydroorotase 
Protein accessionYP_579147 
Protein GI92119418 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCCGG CAACAAGGTC CGCGTGGCGC CGCGGCGTGC GGAAGAAGCT GTCGGGAACG 
ATGACCAAGA CATTTGACGT GATTCTGAGA GCGGGCACCA TCGTCAATCA GGACGGCGAG
GGGGTCGGCG ACATCGCTGT TTCCGGCGGT CGCATCGCTG CCATCGGCGG GCTGGGTCAC
GCCGACGCGG GCGAGGTGAT CGACTGCCGG GGGCTGCATA TCCTGCCCGG CGTGATCGAC
ACCCAGGTGC ATTTCCGCGA GCCGGGGCTG ACGCACAAGG AAGACCTCGA AACCGGCTCG
CGCAGCGCCG TGATGGGCGG CGTGACCGCG GTGTTCGAGA TGCCGAACAC CAATCCGCTG
ACCGTGACCG AGGAGACTTT CACCGCAAAG GTGAGGGCGG GTCACCACCG GATGCACTGC
GACTTCGCTT TCTTCATCGG CGGCACCCGC GACAACGTGC AGGACCTGCC CGAACTGGAG
CGCGCGCCGG GTTGCGCCGG CGTCAAGGTG TTCGTCGGAT CCTCCACCGG CGCGCTGCTG
GTCGAGGACG ATGACAGCCT GCGAAAAATC TTCAGGGTGA TCCGCCGCCG CGCGTCGTTT
CACGCCGAGG ACGAATACCG CCTCAACGAT CGCAAGGGAT TGCGCATCGA GGGCGATCCG
CGCTCGCATC CGGTATGGCG CGACGAAACC GCCGCGTTGC TGGCGACGCA GCGGCTGGTC
AATCTCGCCC GCGAGACCGG AAAGCGCATT CACGTGCTGC ATATCTCGAC CCGCGAGGAG
ATCGAATATC TGCGCGACCA CAAGGATGTC GCTTCCTGCG AGGCGACGCC GCATCACCTG
ACAATGGTCG CGCCCGGATG CTACGAGCGG CTCGGCACGC TGGCGCAAAT GAATCCGCCG
GTGCGCAATG CCGCTCATCG TGCCGGCATC TGGAACGGCA TCAAGCAGGG CATCATCGAC
GTGCTCGGCT CCGATCACGC CCCGCACACG CTGGAAGAAA AGCGGAAGAC CTATCCCGCC
TCGCCATCAG GCATGACCGG CGTGCAGACG CTGGTGCCCT TGATGCTGGA TCACGTCAAT
GCGGACCGGT TGTCGCTGGC GCGTTTTGTC GATCTCACCA GTGCCGGGCC GGCGCGGCTG
TTCAACATCG CCTGCAAGGG GCGGATCGCG GCGGGCTATG ATGCCGACTT CACCGTGGTC
GATCTCAAGC GGAGCGAGAC CATCACCAAC AAGTGGATGG CGTCGCGCGC GGGATGGACG
CCCTATGACG GTGTCGAGGT GACGGGCTGG CCGGTCGGCA CTTTCGTGCG CGGCCGCCGC
GTGATGTGGC AGGGCGAGCT GGCGACGGCA TCCACGGGCG AACCGGTGCG CTTTCTGGAG
ACGCTGAAAC CGTAG
 
Protein sequence
MVPATRSAWR RGVRKKLSGT MTKTFDVILR AGTIVNQDGE GVGDIAVSGG RIAAIGGLGH 
ADAGEVIDCR GLHILPGVID TQVHFREPGL THKEDLETGS RSAVMGGVTA VFEMPNTNPL
TVTEETFTAK VRAGHHRMHC DFAFFIGGTR DNVQDLPELE RAPGCAGVKV FVGSSTGALL
VEDDDSLRKI FRVIRRRASF HAEDEYRLND RKGLRIEGDP RSHPVWRDET AALLATQRLV
NLARETGKRI HVLHISTREE IEYLRDHKDV ASCEATPHHL TMVAPGCYER LGTLAQMNPP
VRNAAHRAGI WNGIKQGIID VLGSDHAPHT LEEKRKTYPA SPSGMTGVQT LVPLMLDHVN
ADRLSLARFV DLTSAGPARL FNIACKGRIA AGYDADFTVV DLKRSETITN KWMASRAGWT
PYDGVEVTGW PVGTFVRGRR VMWQGELATA STGEPVRFLE TLKP