Gene Nham_4004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4004 
Symbol 
ID4031028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp4372828 
End bp4373298 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content61% 
IMG OID637972360 
ProductDNA-directed DNA polymerase 
Protein accessionYP_579134 
Protein GI92119405 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.345637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCTT TTTACGCGTC GGTCGAACAG CGGGACAATC CCGATCTTCG TGGCAAACCG 
GTCGCGGTCG GCGGATCCCG CGAGCACGGT GTCGTGGCGG CTGCAAGCTA CGAAGCCCGC 
AAGTTCGGCG TCAGGTCGGC TATGCCGTCG GTCACCGCGA AGCGACAATG CCCGGACCTC 
ATCTTCGTGA AACCGCGCTT CGAGATCTAC AAGGCTGTCT CGCAGCAGAC CCGCGAAATC 
TTCGCCGAGC ACACGCCGAT CATCGAACCG CTATCGCTCG ACGAGGCTTA CCTGGACGTC 
ACGGAAAACC TGCAAGGAAT TCCGCTGGCG CGCGATGTCG CTAACCGAAG CCTGTTTAAA 
GGCTTCAACG CAAACGCGGC TTCGTCTTGC GCCGCGCGTA CCAAGCCGCC ATGGCGACGA 
CGAGCCAGGC GATCGACGCT GCGACGAAGG CGACGAAAAC GCTGGCTTTG A
 
Protein sequence
MDSFYASVEQ RDNPDLRGKP VAVGGSREHG VVAAASYEAR KFGVRSAMPS VTAKRQCPDL 
IFVKPRFEIY KAVSQQTREI FAEHTPIIEP LSLDEAYLDV TENLQGIPLA RDVANRSLFK 
GFNANAASSC AARTKPPWRR RARRSTLRRR RRKRWL