Gene Nham_3973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3973 
Symbol 
ID4030883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4344217 
End bp4345446 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content61% 
IMG OID637972334 
Productamidohydrolase 
Protein accessionYP_579108 
Protein GI92119379 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAT CAGTCATCGT GTGCGGAAAG CTGTTTGACG GCCTAAGCGA CATGATACTT 
GGGCCGACGG AAATCCTGCT GGAAGACGAC AAAATCATCG AAGTATCGGG CTCTGTCGGT
CGCCCGGGCG GCGCGAAAGT CGTCGACCTA AATGATCGGA CGGTGTCTCC CGGTTTCATC
GACACTCACG TTCATCTCTG CGTCGACGGC TTGAACCTGG CGCGGCAAAC GTTGCAGTGC
TCGCCTGCCA AAGCGCTCGC AGGCCTCCAC CATGCCCAGC AATACATGCG CTACGGCTTC
ACGACGCTTC GCGACATGGG CACGTTGGAT CCGGAATGGC CGACCATCAA CCTGCGCGAC
GCCATCGACA GCGGAATGGC GCGGGGGCCG CGCCTGATCG TTGCTCCTCA CATGATCAGT
GCAACGGCGG GTCACGGCGA CATGCAAGGC ATGTTCCCGT GCCGGTGCCA TATGGGACTC
TCCAGGGTTG CCGACTCGCC GGCGAAAATT CGCGAGCTGG TCCGCATGGA GCACGCCTTC
AGCGCCAACT GGATCAAGAC CATGAACACC GGCGGATATA TGAGCGCCGG CGACGACCCG
GCGCGAGTGA CCTGGTTTGA AGATGAAATG CTGGCTCTCG GACAAACCGC GCAGCAGCTC
GGGCTACCTT TGGCGGTCCA TACCGGAGCC GCAGAGGGAT GCAAGCAGGC ACTACGAGCC
GGCGCACGCA GTATCGAGCA CTGTTACCTC ATTGACGACG AGGGCATCGT GATGGCGGAA
AAGGCGGGAG CATTTCTCGT CCCCACCATG CAAATGACTC GTGAGGACAA GGCGCTTCTG
AAAGCAGGTA AGCTTCCTGA GCACGCGGTC TGGAAATTCC GCCGCGACGT GGCCGCGATT
GAGGAGGCCC AGAAGCGCAT CGCTCGGAGT AAGGCAAAAG TGGCCTACGG AACGGATTGC
GGCATGTTCC CGTTTAGCGA AGGCGTTCTC GAGTTTCAGG CCATGGTGGC AGCGGGCCTC
TGCCATGTGC GCGCGCTGAA GGCGGGCACG AGCGTCGCGG CAGAGCTTTT GCAGCGCGAC
GACCTCGGTG CGATCGCGCC GGGCAAGCAG GCCGATATCG TCGCCATGCC AGGAGATCCG
TTCGAAGATA TCGCCGCTAC GGCGCGGGTG GACTTCGTCA TGAAAGGGGG GCGGATCTAC
CGGCATGGTT CGTTAGATAT CCTTCAGTGA
 
Protein sequence
MAKSVIVCGK LFDGLSDMIL GPTEILLEDD KIIEVSGSVG RPGGAKVVDL NDRTVSPGFI 
DTHVHLCVDG LNLARQTLQC SPAKALAGLH HAQQYMRYGF TTLRDMGTLD PEWPTINLRD
AIDSGMARGP RLIVAPHMIS ATAGHGDMQG MFPCRCHMGL SRVADSPAKI RELVRMEHAF
SANWIKTMNT GGYMSAGDDP ARVTWFEDEM LALGQTAQQL GLPLAVHTGA AEGCKQALRA
GARSIEHCYL IDDEGIVMAE KAGAFLVPTM QMTREDKALL KAGKLPEHAV WKFRRDVAAI
EEAQKRIARS KAKVAYGTDC GMFPFSEGVL EFQAMVAAGL CHVRALKAGT SVAAELLQRD
DLGAIAPGKQ ADIVAMPGDP FEDIAATARV DFVMKGGRIY RHGSLDILQ