Gene Nham_3969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3969 
Symbol 
ID4031717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp4341921 
End bp4342589 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content61% 
IMG OID637972330 
Producthypothetical protein 
Protein accessionYP_579104 
Protein GI92119375 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACTA TCGAAACTTT CGTGCATATT CTGGACTTGG GCGGTACCTT TGTTTTCGCG 
ATCAGCGGGG CCGTTGCTGC AGTCAATCGC CGGCTCGACA TTTTCGGCAT CCTCGTATTG 
TCCTTCGTGG CCGGAAATTT TGGCGGGATC GGTCGCGATG TGCTGATCGG CGCGGTGCCG 
CCGGCCGCCC TGACGGACGG CTTCTATTTG CTAGTTTCGA TGCTGGCGGG GCTCATCACC 
TTCTTCTTGT ACGCCGGCGT CGACAGGCTC CGCAGCCCGG TGCTTCTGTT CGACGCGGCG 
GGACTAGCGT TCTTTGCCGT TGCCGGTGCG CAAAAGGCGA TCGCATTCGG ATTGAGCCCG 
GTTATGTCAG CTCTTCTTGG CATGTTGACC GGCATTGGAG GTGGTATGAC GCGCGACGTG 
CTCCTCGCGG ATATCCCGCA GGTGCTGCAT TCCGATCTCT ACGCTGTTGC AGCATTGGTC 
GGCGCGTCCA TCGTCGTCAT CGGCGATATG CTCGGTCTGG CCTATGGCAT CTCGGCGCTG 
ACCGGCGGGG CTTTGTGCTT CGGTCTTCGC TTCATGGCGA TCAGGCACGG TTGGCGCCTG 
CCCATCGCGC ACTTGTCCGC GCACGGACGC GCGGGCAGCG ACCCTTCCAG CCATGACAAG 
CCATACTGA
 
Protein sequence
MITIETFVHI LDLGGTFVFA ISGAVAAVNR RLDIFGILVL SFVAGNFGGI GRDVLIGAVP 
PAALTDGFYL LVSMLAGLIT FFLYAGVDRL RSPVLLFDAA GLAFFAVAGA QKAIAFGLSP 
VMSALLGMLT GIGGGMTRDV LLADIPQVLH SDLYAVAALV GASIVVIGDM LGLAYGISAL 
TGGALCFGLR FMAIRHGWRL PIAHLSAHGR AGSDPSSHDK PY