Gene Nham_3965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3965 
Symbol 
ID4031713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4337745 
End bp4339307 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content65% 
IMG OID637972327 
Producthypothetical protein 
Protein accessionYP_579101 
Protein GI92119372 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAACC GATTGACATC GGCGAAATCT ACCCTGGCGC TGCGCCGTTG GGGAAATAGA 
GTCGTCGTGA TGCTCGCGGG GATGGCCGCG CTGATCGCAC CGATCTCCGA CGCCACAGCG
AAGCAGGCGC GCCGCGCGCA ACCCGCCGAG ACGACGGCGC CACGCGAGGC AGGCGAGCCG
ATCATGGCAA TCGTGTCGCT CAAGAGTCAG CAGGTCACGT TCTATGATGC CGAGGGCTGG
ATCCTGCGCG CGCCGGTATC GACCGGCATC AAGGAGCGCG AGACGCCAGC CGGCGTCTTC
GCCATCATCG AGAAGGACAA GGACCACCAC TCCACCATGT ATGACGACGC CTGGATGCCG
AACATGCAAC GCATCACCTG GAACGGCCTT GCATTGCATG GCGGGCCGTT GCCCGGCTAT
GCGGCCTCAC ACGGCTGCGT GCGAATGCCT TACGGCTTTG CGGAAAAGCT GTTCGACAAG
ACGCGGATCG GGATGCGCGT GATCATCTCG CCGAACGATG CGGCTCCGGT CGACTTTTCT
CACCCGACAC TATCGCTCTT CGCGCCGAAC GCGGAAATCA TTACAGCTGC TTCGGCAAAG
GCCGAGGCGC TCGCACGCGA GGCCATGGAC GCCGCCACGA CGGCCGACGA GGCCAGGAAG
ACTGCTACGA TAGCAGCTCG CGAGTCGGCG CCGTTAGCCG CGTCTCTGCG CAAGCTGGAA
CGGTTCAAGG CCCGGGCCGA CGCCGAGCTC GTATCCGCCG ACAAGGCGCT GGCCGCGGCC
AAGACCGACC AGGCCAGGGC GAAGGCCGAG GACCGTCAGC AAAAGGCCGC CGCCAAGGCA
GCGGAGCTGG GGACCCAGTT CGACACCGCC AAGGCGGACG CGACATCAAA GCTCGACGCA
GCCAGCGCCG CAAAAGAAGC GGCCAAGACG GCTCAGACAA AAAACGCCGA CACCGCCAAG
GCGGCGCTCG ACGCAAAGCT CGCGCTCGAG CCGGTCTCGA TCTACATCAG TCGCGCGACG
CGAACGCTTT ACGTTCGGCG CAACACGCAT AAGCCGGCGC CGGACGGGGG CGGCGAGGTG
TTCGATGCGA CCATCGAGGT CTCGGTCACG ATCCGCGATC CCGGCAAACC ACTCGGCACG
CATGTGTTCA CGGCGGTGGC GCGCAACGAC GCGGGCCTGC GCTGGACCGC CGTCACGATC
GAGAATGGGG ATGGCGCCAA AAACGCGCTC GACCGCATCA CCATCCCAAA GGAAGTCCTC
GATCGCATCG CGCCGACCGC ATTGCCGCAA TCCTCGATCG TCGTCTCCGA CGAGCCGCTG
AGCGAGGAGA CCAACTATCG TACCGAGTTT GTTGCGGTGC TGAGCGACCA GCCCCAGGGC
GGCTTCATCA CGCGCGAGCC GAGCGAGGTT CTCATGGCGG ACGACAACGG CTGGGGCGAC
GGCAACCAAC AGGAAGACGA CAGCTTCGGC TTCTTTTTCC CGCGCAACCC GACCCCCCAA
CCGAGCAATG CGCGCCGGGG CGGCCGCCAG TTCTTTCCTC CGCTGCAACG AGGCTGGTGG
TAA
 
Protein sequence
MVNRLTSAKS TLALRRWGNR VVVMLAGMAA LIAPISDATA KQARRAQPAE TTAPREAGEP 
IMAIVSLKSQ QVTFYDAEGW ILRAPVSTGI KERETPAGVF AIIEKDKDHH STMYDDAWMP
NMQRITWNGL ALHGGPLPGY AASHGCVRMP YGFAEKLFDK TRIGMRVIIS PNDAAPVDFS
HPTLSLFAPN AEIITAASAK AEALAREAMD AATTADEARK TATIAARESA PLAASLRKLE
RFKARADAEL VSADKALAAA KTDQARAKAE DRQQKAAAKA AELGTQFDTA KADATSKLDA
ASAAKEAAKT AQTKNADTAK AALDAKLALE PVSIYISRAT RTLYVRRNTH KPAPDGGGEV
FDATIEVSVT IRDPGKPLGT HVFTAVARND AGLRWTAVTI ENGDGAKNAL DRITIPKEVL
DRIAPTALPQ SSIVVSDEPL SEETNYRTEF VAVLSDQPQG GFITREPSEV LMADDNGWGD
GNQQEDDSFG FFFPRNPTPQ PSNARRGGRQ FFPPLQRGWW