Gene Nham_3961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3961 
Symbol 
ID4031709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp4333038 
End bp4333610 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content58% 
IMG OID637972324 
Productmembrane protein-like 
Protein accessionYP_579098 
Protein GI92119369 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.201378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGC GCGGTTCGCA AAGCACGCGC GCGCCGTCAC AAGCTCGTAA TAACATTGAA 
GCCATTCTGC GCTTCGAAAA GGAGGACGAA AAAGAGCTCG CCCTTCATCA CCGCATTTTT 
CATGCGATCG GGTGGTTCTT CGGGACCACC CATTTTCTCT CCGCCCAATG TCTTGCAGTT 
TGCCTTTGGA TCGCGCTGAA TAGCCTGGTC TCCTCTCATC AAGCCATCGA CCCTTATCCT 
TTTCCGCTGC TGGCGACGTT TCTGTCGCTG GAGGTCGTGC TGTTGACCTC CTGCGTGCTG 
ATGCGGCAAA ACGCCATCGA TCGTACCTCT GAAAGGCGCG ATCATCTCGA GTTGCAAATC 
AATCTCCTGG CCGAGCAGGG CAACCGACTC ATCGATCAAT CTCCGCCGCG CCGCGCCTGT 
TCTGCCCATC GCGATCGGCC GACCAAGCTC GCCACTCCAT TGACCGCTTC CCAACAGGCG 
GTCATCGCAC CTCGGCAACA GACCGCCAGC GCCGAAATCC CCATAGCATC TGACGCGCCA 
CCTCGCCCGA CATCCCGCGG TTTCCTCCAT TGA
 
Protein sequence
MTARGSQSTR APSQARNNIE AILRFEKEDE KELALHHRIF HAIGWFFGTT HFLSAQCLAV 
CLWIALNSLV SSHQAIDPYP FPLLATFLSL EVVLLTSCVL MRQNAIDRTS ERRDHLELQI 
NLLAEQGNRL IDQSPPRRAC SAHRDRPTKL ATPLTASQQA VIAPRQQTAS AEIPIASDAP 
PRPTSRGFLH