Gene Nham_3955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3955 
Symbol 
ID4031703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4328849 
End bp4329877 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content64% 
IMG OID637972318 
Producttransposase IS116/IS110/IS902 
Protein accessionYP_579092 
Protein GI92119363 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAGAGG TTAGCACGAT CGGGTTGGAT TTGGCGAAGA TGGTCTTCCA GGTGCACGGT 
GCCGATGCGA GCGGCGCGGT CGTGTTCCGC AAGACACTTC GGCGCGCCAA GGTCCTCGAG
TTCTTCCGCG ATCTGCCACG TTGCGTCGTC GCGATGGAGG CGTGCGGCGG GGCGCATCAT
TGGGCTCGCG AGATCGGTCG GTTGGGACAT GAGGTGCGGC TCGTCCCACC CATTTACGTC
AAACCGTTCG TAAAGCGTCA GAAGAACGAT GCGTCCGACG CGGAGGCGAT CTGCGAGGCA
GCGCAGCGTC CGACGATGCG CTTCGTCGCG GTGAAGAGCG AGTCGGCCCA GGCAAGCGCC
GCAATCTTCC GCACGCGCGA TCTACTGGTT CGCCAGCGAA CGCAGCTGAT TAACGCGGTG
CGCGGGCAAC TCACCGAGTA TGGCCTAGTC GCCGCTAAGG GAACCGCGAA CCTGCCGAGG
CTGCTGGCAT TGGTCGACGA GCCAGGCTCC GATCTGCCGC AGGCCACGCG TGCGATGCTC
GATGTGCTGA TCGGGATGGT AATGATGCTC GCGGAACAGA TCAACGCGCT GGACCGCGAG
ATCGCCAGGC GCGCCAAGGA AGAAGATATG CCTTCGCGGT TGATGACGAT ACCGGGTGTC
GGGCCGATCA CTGCGACAGC CATCGCGGCT CTTGCTCCAC CGGTGGAGAC GTTCCGGAAA
GGGCGCGACT TCGCCGCCTG GCTCGGCCTG ACGCCGGTGC AACGATCCAC CGGCGGTAAG
CAGAAGCTCG GAGCCACATC CAAGATGGGC GAGCGGACCA TACGCCGTCT GCTCATCATT
GGTGCAGCGG CACTGGTTCG CCAGACAAGC CGACGCGAAC CGCCGCCAGG ATCATGGTTG
GCGCGCATGC TCGCCCGAAA GCCACGCATG CTGGTTATCA CCGCGCTCGC AAACAAGATG
GCGCGAACTG TTTGGGCGCT GCTCGCGCAC AACGAAGTTT ACCGAGCTCC CGCTGTAGCC
GCTACGTAA
 
Protein sequence
MTEVSTIGLD LAKMVFQVHG ADASGAVVFR KTLRRAKVLE FFRDLPRCVV AMEACGGAHH 
WAREIGRLGH EVRLVPPIYV KPFVKRQKND ASDAEAICEA AQRPTMRFVA VKSESAQASA
AIFRTRDLLV RQRTQLINAV RGQLTEYGLV AAKGTANLPR LLALVDEPGS DLPQATRAML
DVLIGMVMML AEQINALDRE IARRAKEEDM PSRLMTIPGV GPITATAIAA LAPPVETFRK
GRDFAAWLGL TPVQRSTGGK QKLGATSKMG ERTIRRLLII GAAALVRQTS RREPPPGSWL
ARMLARKPRM LVITALANKM ARTVWALLAH NEVYRAPAVA AT