Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3955 |
Symbol | |
ID | 4031703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 4328849 |
End bp | 4329877 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637972318 |
Product | transposase IS116/IS110/IS902 |
Protein accession | YP_579092 |
Protein GI | 92119363 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAGAGG TTAGCACGAT CGGGTTGGAT TTGGCGAAGA TGGTCTTCCA GGTGCACGGT GCCGATGCGA GCGGCGCGGT CGTGTTCCGC AAGACACTTC GGCGCGCCAA GGTCCTCGAG TTCTTCCGCG ATCTGCCACG TTGCGTCGTC GCGATGGAGG CGTGCGGCGG GGCGCATCAT TGGGCTCGCG AGATCGGTCG GTTGGGACAT GAGGTGCGGC TCGTCCCACC CATTTACGTC AAACCGTTCG TAAAGCGTCA GAAGAACGAT GCGTCCGACG CGGAGGCGAT CTGCGAGGCA GCGCAGCGTC CGACGATGCG CTTCGTCGCG GTGAAGAGCG AGTCGGCCCA GGCAAGCGCC GCAATCTTCC GCACGCGCGA TCTACTGGTT CGCCAGCGAA CGCAGCTGAT TAACGCGGTG CGCGGGCAAC TCACCGAGTA TGGCCTAGTC GCCGCTAAGG GAACCGCGAA CCTGCCGAGG CTGCTGGCAT TGGTCGACGA GCCAGGCTCC GATCTGCCGC AGGCCACGCG TGCGATGCTC GATGTGCTGA TCGGGATGGT AATGATGCTC GCGGAACAGA TCAACGCGCT GGACCGCGAG ATCGCCAGGC GCGCCAAGGA AGAAGATATG CCTTCGCGGT TGATGACGAT ACCGGGTGTC GGGCCGATCA CTGCGACAGC CATCGCGGCT CTTGCTCCAC CGGTGGAGAC GTTCCGGAAA GGGCGCGACT TCGCCGCCTG GCTCGGCCTG ACGCCGGTGC AACGATCCAC CGGCGGTAAG CAGAAGCTCG GAGCCACATC CAAGATGGGC GAGCGGACCA TACGCCGTCT GCTCATCATT GGTGCAGCGG CACTGGTTCG CCAGACAAGC CGACGCGAAC CGCCGCCAGG ATCATGGTTG GCGCGCATGC TCGCCCGAAA GCCACGCATG CTGGTTATCA CCGCGCTCGC AAACAAGATG GCGCGAACTG TTTGGGCGCT GCTCGCGCAC AACGAAGTTT ACCGAGCTCC CGCTGTAGCC GCTACGTAA
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Protein sequence | MTEVSTIGLD LAKMVFQVHG ADASGAVVFR KTLRRAKVLE FFRDLPRCVV AMEACGGAHH WAREIGRLGH EVRLVPPIYV KPFVKRQKND ASDAEAICEA AQRPTMRFVA VKSESAQASA AIFRTRDLLV RQRTQLINAV RGQLTEYGLV AAKGTANLPR LLALVDEPGS DLPQATRAML DVLIGMVMML AEQINALDRE IARRAKEEDM PSRLMTIPGV GPITATAIAA LAPPVETFRK GRDFAAWLGL TPVQRSTGGK QKLGATSKMG ERTIRRLLII GAAALVRQTS RREPPPGSWL ARMLARKPRM LVITALANKM ARTVWALLAH NEVYRAPAVA AT
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