| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3923 |
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| Symbol | |
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| ID | 4032427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 4301955 |
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| End bp | 4303454 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637972297 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_579071 |
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| Protein GI | 92119342 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGTCG TGGAGACGAT TGCGAAGATC CGTCGCGCGT ATTTCGTTCA CGGTCAGCCG
ATCAAGGCGA TATGCCGTGA TCTCGGTGTT TCCCGGAAGG TGGTGCGGAA GGTCATCCGT
TCGGAGGCGA CTGAGTTCCG CTACGAGCGG GAAGCGCAGC CGCTTCCGAG GATCGGACCC
TGGAGCGACA AGCTCGATCA GTTGCTGGTT GCGAATGAAG GTAAGGCGTC GCGCGAGCGC
CTGACGCTGA TCCGCCTGTT CGAGGAACTG CGTGGCTGCG GTTATGCCGG GGGCTACGAT
GCCGTACGGC GCTACGCCCG ACGGTGGAGC AAGGAGCGGG GCGCCACGAC GGCCGCGGCC
TATGTGCCGC TGAGCTTCGC GCCGGGTGAA GCCTACCAGT TCGACTGGAG CCACGAGGTC
GTCCTGCTGA ACGGCGCGAC GGTGACCGTG AAGGTGGCGC ACGTCCGGCT CTGCCATAGC
CGCATGCTGT TCGTGCGAGC TTATCCGCGC GAGACGCAGG AGATGGTGTT CGACGCCCAC
GACCGGGCAT TCGCCCTGTT CAAGGGCACC TGCCAGCGCG GCATCTACGA CAACATGAAG
ACGGCGGTGA CGACCATCCT CGTCGGCAAA GAGCGTCTCT ACAATCGACG GTTCCTGCAG
ATGTGCAGCC ATTACCTGGT CGATCCGGTC GCCTGCACGC CGGCATCCGG CTGGGAGAAG
GGACAGGTCG AGAACCAGGT CGGGCTGGTC CGTGAGCGCT TCTTCACGCC GCGATTGCGG
TTCAAAAACT ATGATGAGTT GAACGCCTGG CTGCTCGATA AATGCATCGC CTACGCCAAG
GCGCACCGCC ATCCAGAACT GACCGAGCAG ACAGTGTGGG AGGTGTTTGA GGCGGAACGG
CCAAAGCTCG TTCCCTATGC CGGCCGGTTC GATGGATTCC ACGCAGTGCC GGCATCGGTC
TCGAAGACCT GCCTGGTGCG CTTCGACAAC AACAAATACT CGGTGGCTGC GAGCGCGGTT
GGGCGTCCGG TCGAGGTGCA TGCCTATGCC GACCGCATTG TAATCCGCCA GGACGGGCGC
ATCGTTGCCG AGCATCCTCG CTCCTTCGGC CGCGGCGAGA CGACCTACGA TCCCTGGCAT
TACGTGCCTG TCCTGGCCCG CAAGCCCGGC GCCTTGCGCA ACGGTGCTCC CTTCAAGGAT
TGGGTGCTGC CGGCCGCGAT GGAACGTGTG CGGCGCAAGC TCGCGGGCGC CGCCGACGGC
AACCGGCAGA TGGTCGATAT CCTCAACGCG GTGCTGACCG ACGGCTTGCC CGCCGTCGAG
GCTGCCTGCG CCGAGGCGCT CTCCCACGGC GTCCATTCCG CCGATGTCGT TCTCAACATC
CTGGCTCGCC AGCGCGATCC GGCGCCACCA GGCAACATCC TCACACCGGA TGCGCTGAAG
CTACGTCATG CACCCATCGC CGATTGTGCC CGTTACGACA ACCTCAGGAG AACGGTCTGA
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| Protein sequence | MLVVETIAKI RRAYFVHGQP IKAICRDLGV SRKVVRKVIR SEATEFRYER EAQPLPRIGP
WSDKLDQLLV ANEGKASRER LTLIRLFEEL RGCGYAGGYD AVRRYARRWS KERGATTAAA
YVPLSFAPGE AYQFDWSHEV VLLNGATVTV KVAHVRLCHS RMLFVRAYPR ETQEMVFDAH
DRAFALFKGT CQRGIYDNMK TAVTTILVGK ERLYNRRFLQ MCSHYLVDPV ACTPASGWEK
GQVENQVGLV RERFFTPRLR FKNYDELNAW LLDKCIAYAK AHRHPELTEQ TVWEVFEAER
PKLVPYAGRF DGFHAVPASV SKTCLVRFDN NKYSVAASAV GRPVEVHAYA DRIVIRQDGR
IVAEHPRSFG RGETTYDPWH YVPVLARKPG ALRNGAPFKD WVLPAAMERV RRKLAGAADG
NRQMVDILNA VLTDGLPAVE AACAEALSHG VHSADVVLNI LARQRDPAPP GNILTPDALK
LRHAPIADCA RYDNLRRTV
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