| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3886 |
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| Symbol | |
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| ID | 4029497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4263399 |
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| End bp | 4264721 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637972267 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_579041 |
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| Protein GI | 92119312 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTCG AAACACCCGA TAAGATCAGG AGCCTTCAGA GAAAGCTGTA CCGCAAGGCG
AAGGCTGAGC CTGCTTTCCG CTTTTACATT CTCTACGACA AAATCTGTCG TGAGGACGTC
CTTCTGCGTG CCTATACGCT TGCCCGCGCC AATGCGGGTG CGCCAGGCGT GGACGGGATG
ACCTTCGGAC AGATCGAGGG GGCGGGTGTA GACGCGTGGC TGGCGGGCTT GCGCGAGGAC
CTCGTCTCGA AGACCTACCA GCCTGATCCA GTGCGGCGGG TGATGATCCC AAAGCCTGGC
GGCGGCGAAC GTCCGCTCGG CATCCCGACG ATCCGGGACC GGGTGGTTCA GGCCGCAGCC
AAGATCGTGC TGGAGCCAAT CTTCGAGGCG GGCTTCGAGG ACGGTGCCTA CGGCTATCGG
CCGCGTCGGA GCGCGATCGA TGCCGTCAAG GAAACGCACC GGCTGCTATG CCGGGGCTAC
ACCGACGTAG TCGATGCCGA CTTGTCGAAG TATTTCGACA CGATCCCGCA TGCGGACCTC
CTCCGATCGG TGGCCCGCCG CGTCCTCGAC CGGAATGTGC TGCGGCTGAT CAAGCTGTGG
CTGCAAGTGC CGGTCGAGGA ACGGGATGGC GACGGGAAAC GGCACATGAG CGGCGGCAAG
AGCAGCACTC GCGGCACCCC CCAGGGTGGG GTCGTCAGTC CGTTGCTCTC CGTCATCTAC
ATGAACCGAT TCCTGAAGCA TTGGCGGTTG ACAGGGCGCG GCGAGGTGTT CCACGCACAT
GTCATCTCCT ATGCCGACGA CTTCGTCATC CTCAGCCGCG GACACGCGGA AGAGGCTCTG
ACCTGGACGA GGGCGGTGAT GACGAAACTC GGGCTGACAC TCAACGAGGC GAAAACCTCG
GTGAAGAATG CCCGGCGTGA AGGCTTCGAC TTCCTTGGCT ACACACTGGG ACCGCGCCAC
CTTCCCAATG GAGGTCGCTG GTACTTGGGG GCGAGCCCGT CCAAGAAGAG CATGCAGCGG
GTCAAGGTGA AGATTGGCGA ACTGCTGGTG CCCGGCAACA AGGGCGCTTG GGACGAAGTG
CGAGCACGGT TGAACCGCGT TCTGCGCGGT TGGTCGGCCT ACTTCTCCTA CGGCGCCCTC
GCGTCGGCAT ACGAGGCCGT CGATCAGCAT GTCTATGACC GAACGCGGCA CTTCCTCCGT
CAACGACACA AAGTGCAGGG GCGTGGAGCG GACCAGTTCT CCCGAGAACA TGTCTATGGG
GAATTGGCCG TCCGATGCCT TCGACGCGAG CGCAGTCGGT CGTCGCCGTG GGCCTTGCGG
TGA
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| Protein sequence | MSLETPDKIR SLQRKLYRKA KAEPAFRFYI LYDKICREDV LLRAYTLARA NAGAPGVDGM
TFGQIEGAGV DAWLAGLRED LVSKTYQPDP VRRVMIPKPG GGERPLGIPT IRDRVVQAAA
KIVLEPIFEA GFEDGAYGYR PRRSAIDAVK ETHRLLCRGY TDVVDADLSK YFDTIPHADL
LRSVARRVLD RNVLRLIKLW LQVPVEERDG DGKRHMSGGK SSTRGTPQGG VVSPLLSVIY
MNRFLKHWRL TGRGEVFHAH VISYADDFVI LSRGHAEEAL TWTRAVMTKL GLTLNEAKTS
VKNARREGFD FLGYTLGPRH LPNGGRWYLG ASPSKKSMQR VKVKIGELLV PGNKGAWDEV
RARLNRVLRG WSAYFSYGAL ASAYEAVDQH VYDRTRHFLR QRHKVQGRGA DQFSREHVYG
ELAVRCLRRE RSRSSPWALR
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