| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3871 |
|---|
| Symbol | |
|---|
| ID | 4030110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 4251423 |
|---|
| End bp | 4252361 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637972257 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_579031 |
|---|
| Protein GI | 92119302 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1273] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.316651 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCGC GGGCAAATTG GAAGGGCTTT CTGAAGCTGT CGTTGGTGAC CTGTCCGGTG
GCGCTTTTTC CGGCGACGTC GGAGACCGAA AAGGTCACTT TCAACCAAAT CAACAAGCAG
ACCGGCCATC GCATCAAGTA CACCAAGGTC GACGCCGAGA CCGGTGACGA GGTGGCCTCC
GAAGACATCA TCAAGGGCTA CAAGGTCGAC ATCGACACCT ACGTCACCGT CGACAAGGAC
GAGCTCGAGA ACCTCGCACT CGAAAGCACC CGGACCATCG ACATCGACGA ATTCGTTCCG
CGGTCCGAAA TCGATGAGCT TTACCTGGTG CGGCCTTATT ACATCGTGCC GGACGGCAAG
GTCGGCCACG ACGCCTACGC GGTCATCCGC GAAACCATTC GGACGATGGA CAAGGTCGCG
ATCGCACGCG TCGTCCTGAC CAACCGCGAG CACATCATCG CGCTCGAGGC GCGGGGGAAG
GGCCTCGTCG GCATGCTTTT GCGATACCCC TACGAGATTC GCGACGAGAA CGAATACTTC
GACGACATCC AGGACGTGAA GGTCACGAAG GAAATGCTCG ACCTGGCCAG GCACATCGTG
GAGACCAAGT CCGCCGATTT CGAACCCGAA AAGTTCGAGG ACCGCTACGA AAACGCGCTC
GTCGAACTGC TGAACCAGAA GCGCAAGGGC GAGCCTGTCC GCACGGCGGT CAAATCGCGC
GATACCGGCA ACGTCATCAA TCTGATGGAC GCGCTTCGCA AGAGCCTCAC GACCGAAGGC
AAGACATCCA CGCCTTCGGC AACGAAGAAG CAATCCAAGA AACCTCCCTC CGGCCAGCGC
GAGATGCTGA TGGCCATCCC CGGCAAGGGC GAAGGCAAGA AGGCCGCCGC CAAAGAGCCG
AAGAAATCGC GCCCGGCACG CGCCCGCAAG GCCGGATAA
|
|---|
| Protein sequence | MAPRANWKGF LKLSLVTCPV ALFPATSETE KVTFNQINKQ TGHRIKYTKV DAETGDEVAS
EDIIKGYKVD IDTYVTVDKD ELENLALEST RTIDIDEFVP RSEIDELYLV RPYYIVPDGK
VGHDAYAVIR ETIRTMDKVA IARVVLTNRE HIIALEARGK GLVGMLLRYP YEIRDENEYF
DDIQDVKVTK EMLDLARHIV ETKSADFEPE KFEDRYENAL VELLNQKRKG EPVRTAVKSR
DTGNVINLMD ALRKSLTTEG KTSTPSATKK QSKKPPSGQR EMLMAIPGKG EGKKAAAKEP
KKSRPARARK AG
|
|---|
| |