| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3864 |
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| Symbol | |
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| ID | 4030103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 4244072 |
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| End bp | 4245685 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637972253 |
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| Product | recombinase |
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| Protein accession | YP_579027 |
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| Protein GI | 92119298 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.802308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTG CGATCTACGC AAGGTTTAGC TCAGACAAAC AAACCGACCG GTCCATTGAG
GATCAGGTCG CACTCTGCCG CGCCATTTGC GAACGGGAAG GATTGATCGT CGTCGCCGTC
TACGATGACC GCGCCATTTC CGGCGCAAGT ACGTTGAACC GGCTGGGCTG GCAGCGCCTC
ATGCGTGACG CCAAAGCCGG CAAGTTTGAC GTTCTTGTTG CTGAAGCACT GGATCGCATT
TCCCGCGATC AGGAAGACTT GGCTGGCATT CATAAGCGGC TCCGCTTCGC CGGCATTGAA
ATCCGTACCG CCCAGGACGG CATCGCGGGT GACATTCATA TCGGTGTGAA GGGCCTGCTC
GGCTCGCTTT ATCTCAAGGA CCTCGCCCAG AAAACGCGAC GAGGACAGGC CGGCGTTATT
CGCGATGGGC GCCACAACGG AGGGCGCAGT TACGGTTATC GCCCGATACC GGGAAAGCGC
GGAGAGCTTG AAATTGATGA AGCAGAGGCG GCGACCGTCC GCCAGATCTT CGCCGACTAC
CTGGACGCAA GATCACCACG AGACATCGCC GCCGCCCTGA ACAAGAAAGG TGTACCGGGG
CCGCGCGGTG GCGTGTGGAA TGCTTCGACC ATCGCTGGCA GCCGCAAGCG CTTGAATGGC
ATTCTGCAGA ACGAACTGTA CGTTGGCCGG ATCGTTTGGA ACCGACAGAC ATTCATCAAA
GACCCGGAGA CCGGCAAGCG CATCAGCCGC GAAAATCCGC GGGAGCAGTG GATGAGCGCC
GACGCGGAAC ACCTGCGTAT CATCGATGCC GATACCTGGG TCAGGGTCCG CAAACGGCGA
GAGGATCGCG GAGGCCCGAA AGGGGCCTAT GCTACCCGGC CGAAACATCT GCTTTCCGGA
CTGGTTAAGT GTGGGTGCTG CGGGTCAGGC TACATCGTCG GCGGTAACGA CAAGCGCGGC
TCCCTCCTAG TCTGTACGCG TATGAAGGAA ACCGGCCTTT GTGAAAACCG GCGAACCGTG
CCGCGCGAGA AGATCGAAGC GCTGGTGTTG AAAGGGATAG AGGAAAACCT GGCTGCGCCG
GAACTGATCG CAGAATACGT CCGTGAATAT CATCGAATGT CCCGCGAATT GCACAGCTCT
ACGGCACACC GCCACCGCGA CCTCGAAAAG CGGCTTGGGA ACGTCAACGG CGCGATTTCA
AAGGCGGTGG ATGTTCTGTT GGCTGAAGCG CCAAGTCGCG CCCTGCGCGA CCGCTTGGCG
GCCCTGGAGG CGGAGCGCGA TGAGATCGAG GCAGAGATCG CCGCGCTGGC CCCGCCGGCC
GTCGAATTCC ATCCGAACGC GGCGAACGCC TACCGTGACA AGGTTCGGCA CCTGAAAAGG
GCTCTGGCCG AGTCCGACGA GGACAGCCGT GCGGCGGCCC ATGAGGCGAT TCGCGAAATT
GTGGAGAAAG TCGTTATTCA TCCACGCGGA CCATACAAGC CCGTGGAGAT CGAGATTTAC
GGCCAACTCG CCGCCCTGCT CAGGATTTCT GAGAGGGCGG CGGCCGATCC CCTAGAGTCT
AGGGGGGTAC TGGTTGCGGG GATAGGATTT GAACCTATGA CCTTCAGGTT ATGA
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| Protein sequence | MKAAIYARFS SDKQTDRSIE DQVALCRAIC EREGLIVVAV YDDRAISGAS TLNRLGWQRL
MRDAKAGKFD VLVAEALDRI SRDQEDLAGI HKRLRFAGIE IRTAQDGIAG DIHIGVKGLL
GSLYLKDLAQ KTRRGQAGVI RDGRHNGGRS YGYRPIPGKR GELEIDEAEA ATVRQIFADY
LDARSPRDIA AALNKKGVPG PRGGVWNAST IAGSRKRLNG ILQNELYVGR IVWNRQTFIK
DPETGKRISR ENPREQWMSA DAEHLRIIDA DTWVRVRKRR EDRGGPKGAY ATRPKHLLSG
LVKCGCCGSG YIVGGNDKRG SLLVCTRMKE TGLCENRRTV PREKIEALVL KGIEENLAAP
ELIAEYVREY HRMSRELHSS TAHRHRDLEK RLGNVNGAIS KAVDVLLAEA PSRALRDRLA
ALEAERDEIE AEIAALAPPA VEFHPNAANA YRDKVRHLKR ALAESDEDSR AAAHEAIREI
VEKVVIHPRG PYKPVEIEIY GQLAALLRIS ERAAADPLES RGVLVAGIGF EPMTFRL
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