Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3856 |
Symbol | |
ID | 4030095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 4235340 |
End bp | 4236725 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637972245 |
Product | hypothetical protein |
Protein accession | YP_579019 |
Protein GI | 92119290 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.40054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTGA GGCGCCTGCT TGGGCTTGCA GCTCTGGCGA CCCTCGCGCC CGCTGCCGCC TTCGCGCAAT TCAATCAAAC GTCCATCATC AGCACCAGCA TGGGCGGGAT CGTCAGTGGC ACTTACGGGT ATTTCAAATA TGTGTCCGCC ACCTACGGCC TTGGCACCGG CGCAAGCAAG CTGGCCAGTC TTACCGATGT CGATGTCAGC GGCAAAGTCA GCGGCAGCGT GCTGGTCTAC ACCGGCGCCA CCACCAGCTG GACGGCCCTG CCCATCCAGA ACGTCATGAG CACCACCACC ATCCTCACCA ACTGGCCTGA CGCGATTGGC TGCCTCCTTT CCACGGGAAC GTATTATATT TACTTGGCTA CAGCGCTGCC TGCCAATGGC AGTAGTCTCT ACCTCTATCG CCCCATCCGT AACGCCGGAG GCGATACGTA TGCGGAATTC AATTCTGATG GGACGTATAA CAGCGCCTCC AGCACCAGCG ACACCAATGC CTCGGATTGC AATGGCCAAA GCGTCTCGCA ACTTTACGCC AGCGGCCGGG CTTTCAACTT CATCGGCAAC TCTGGCAGCG GCAGCGGCGA CCGCATCACC AGTGGCACCA CCAGCATGGT GGCCAACAGC GCCACCAGCA TCATCAGCAT TACCAATGCA GGGGTAACGG CGGGCTATTT CAACAGCAAC GGCGTGCTGA CCGTGCCGGG TATCAGCGCC ACGTCCAACC TCACCAGCGT CACTTCGCTT TATGCCAGCG GCAACGTGGG GATTGGGACG ACGAGCCCAA CTACAAAGCT TGATATTGCC GGCACCGGAT TGCACCTGGG TAGCACGACC AATGCCTTTT TGTATCCCGA CTCGGGTGCT GCTTATAACT CTGGGATTGA TATATACAAA ACCGGTGCCC GCAAATGGGT GCTGTATAAC CAAGGCAACA ACGATAATTT TTACATACTG GGCAGCGACG GTTCGTCTGG CGTCTACCTG AGCCAGGGGG CCACCAGTTG GAGTGCTTCA TCGGATATCC GTCTGAAAAA GAATATTGAA ACCCTGCGCG TACTTGACCG GCTAGATGGC TACCGGGCCG TACAATTTAA CTGGAAGCAG AGTGGCAAGC ATGACCTGGG GGTCATTGCC CAGGAGCTTT ACAAAATATT CCCCGAAGTG GTGAACAAGG GCAGCGATAG CGGCACCGTT GAAAAAATGA ACGATAAGGG TGTGTGGAGC GTTCAATACG ACAAGCTTGG TGCGCTGGCA TTAGAGGCCG TCAAGGAACT CAAAGCCGAC AACGATAACC TGCGCAGCGC GAATGGTTCA CTACAGCGTC AGGTGAACGA CCTCCGCGCT GCCGTCGAGT CGTTGCAGCG TCAGACACAT CGCTAA
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Protein sequence | MRLRRLLGLA ALATLAPAAA FAQFNQTSII STSMGGIVSG TYGYFKYVSA TYGLGTGASK LASLTDVDVS GKVSGSVLVY TGATTSWTAL PIQNVMSTTT ILTNWPDAIG CLLSTGTYYI YLATALPANG SSLYLYRPIR NAGGDTYAEF NSDGTYNSAS STSDTNASDC NGQSVSQLYA SGRAFNFIGN SGSGSGDRIT SGTTSMVANS ATSIISITNA GVTAGYFNSN GVLTVPGISA TSNLTSVTSL YASGNVGIGT TSPTTKLDIA GTGLHLGSTT NAFLYPDSGA AYNSGIDIYK TGARKWVLYN QGNNDNFYIL GSDGSSGVYL SQGATSWSAS SDIRLKKNIE TLRVLDRLDG YRAVQFNWKQ SGKHDLGVIA QELYKIFPEV VNKGSDSGTV EKMNDKGVWS VQYDKLGALA LEAVKELKAD NDNLRSANGS LQRQVNDLRA AVESLQRQTH R
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