Gene Nham_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3856 
Symbol 
ID4030095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4235340 
End bp4236725 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content57% 
IMG OID637972245 
Producthypothetical protein 
Protein accessionYP_579019 
Protein GI92119290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.40054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTGA GGCGCCTGCT TGGGCTTGCA GCTCTGGCGA CCCTCGCGCC CGCTGCCGCC 
TTCGCGCAAT TCAATCAAAC GTCCATCATC AGCACCAGCA TGGGCGGGAT CGTCAGTGGC
ACTTACGGGT ATTTCAAATA TGTGTCCGCC ACCTACGGCC TTGGCACCGG CGCAAGCAAG
CTGGCCAGTC TTACCGATGT CGATGTCAGC GGCAAAGTCA GCGGCAGCGT GCTGGTCTAC
ACCGGCGCCA CCACCAGCTG GACGGCCCTG CCCATCCAGA ACGTCATGAG CACCACCACC
ATCCTCACCA ACTGGCCTGA CGCGATTGGC TGCCTCCTTT CCACGGGAAC GTATTATATT
TACTTGGCTA CAGCGCTGCC TGCCAATGGC AGTAGTCTCT ACCTCTATCG CCCCATCCGT
AACGCCGGAG GCGATACGTA TGCGGAATTC AATTCTGATG GGACGTATAA CAGCGCCTCC
AGCACCAGCG ACACCAATGC CTCGGATTGC AATGGCCAAA GCGTCTCGCA ACTTTACGCC
AGCGGCCGGG CTTTCAACTT CATCGGCAAC TCTGGCAGCG GCAGCGGCGA CCGCATCACC
AGTGGCACCA CCAGCATGGT GGCCAACAGC GCCACCAGCA TCATCAGCAT TACCAATGCA
GGGGTAACGG CGGGCTATTT CAACAGCAAC GGCGTGCTGA CCGTGCCGGG TATCAGCGCC
ACGTCCAACC TCACCAGCGT CACTTCGCTT TATGCCAGCG GCAACGTGGG GATTGGGACG
ACGAGCCCAA CTACAAAGCT TGATATTGCC GGCACCGGAT TGCACCTGGG TAGCACGACC
AATGCCTTTT TGTATCCCGA CTCGGGTGCT GCTTATAACT CTGGGATTGA TATATACAAA
ACCGGTGCCC GCAAATGGGT GCTGTATAAC CAAGGCAACA ACGATAATTT TTACATACTG
GGCAGCGACG GTTCGTCTGG CGTCTACCTG AGCCAGGGGG CCACCAGTTG GAGTGCTTCA
TCGGATATCC GTCTGAAAAA GAATATTGAA ACCCTGCGCG TACTTGACCG GCTAGATGGC
TACCGGGCCG TACAATTTAA CTGGAAGCAG AGTGGCAAGC ATGACCTGGG GGTCATTGCC
CAGGAGCTTT ACAAAATATT CCCCGAAGTG GTGAACAAGG GCAGCGATAG CGGCACCGTT
GAAAAAATGA ACGATAAGGG TGTGTGGAGC GTTCAATACG ACAAGCTTGG TGCGCTGGCA
TTAGAGGCCG TCAAGGAACT CAAAGCCGAC AACGATAACC TGCGCAGCGC GAATGGTTCA
CTACAGCGTC AGGTGAACGA CCTCCGCGCT GCCGTCGAGT CGTTGCAGCG TCAGACACAT
CGCTAA
 
Protein sequence
MRLRRLLGLA ALATLAPAAA FAQFNQTSII STSMGGIVSG TYGYFKYVSA TYGLGTGASK 
LASLTDVDVS GKVSGSVLVY TGATTSWTAL PIQNVMSTTT ILTNWPDAIG CLLSTGTYYI
YLATALPANG SSLYLYRPIR NAGGDTYAEF NSDGTYNSAS STSDTNASDC NGQSVSQLYA
SGRAFNFIGN SGSGSGDRIT SGTTSMVANS ATSIISITNA GVTAGYFNSN GVLTVPGISA
TSNLTSVTSL YASGNVGIGT TSPTTKLDIA GTGLHLGSTT NAFLYPDSGA AYNSGIDIYK
TGARKWVLYN QGNNDNFYIL GSDGSSGVYL SQGATSWSAS SDIRLKKNIE TLRVLDRLDG
YRAVQFNWKQ SGKHDLGVIA QELYKIFPEV VNKGSDSGTV EKMNDKGVWS VQYDKLGALA
LEAVKELKAD NDNLRSANGS LQRQVNDLRA AVESLQRQTH R